RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 CDYLQ9Y232 598 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 PLEKHM1Q9Y4G2 1056 aa14.9□□□□□ -0.02
NPHP4-205ENST00000466897 OR5K4A6NMS3 321 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 POC1B-GALNT4F8VUJ3 575 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 YY2O15391 372 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 FLRT2O43155 660 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 SDC3O75056 442 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 FAM155BO75949 473 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 KRT38O76015 456 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 ANXA6P08133 673 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 CELA2BP08218 269 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-205ENST00000466897 CBSLP0DN79 551 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 ALPPL2P10696 532 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 F3P13726 295 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 AK4P27144 223 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-205ENST00000466897 PBLDP30039 288 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-205ENST00000466897 CBSP35520 551 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 ABCG1P45844 678 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 LIMK1P53667 647 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 CDKN2DP55273 166 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 TIAL1Q01085 375 aaKnown RBP eCLIP14.89□□□□□ -0.03
NPHP4-205ENST00000466897 DNAJC3Q13217 504 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 C1orf61Q13536 156 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 ZKSCAN8Q15776 578 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-205ENST00000466897 INAVAQ3KP66 663 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 AASDHQ4L235 1098 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-205ENST00000466897 SYTL3Q4VX76 610 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 LGSNQ5TDP6 509 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 LRRC8EQ6NSJ5 796 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 SLC30A9Q6PML9 568 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 FAM83HQ6ZRV2 1179 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-205ENST00000466897 NEK10Q6ZWH5 1172 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 CFAP206Q8IYR0 622 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 SLC22A15Q8IZD6 547 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 IQCKQ8N0W5 287 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 RIBC1Q8N443 379 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-205ENST00000466897 DCLK2Q8N568 766 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 ZBTB2Q8N680 514 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 FAM181AQ8N9Y4 354 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 OR2I1PQ8NGU4 316 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 OR4C6Q8NH72 309 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 CD200R1Q8TD46 325 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 INPP5DQ92835 1189 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 TMEM159Q96B96 161 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 MTBPQ96DY7 904 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 ATXN7L3BQ96GX2 97 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 ELMO2Q96JJ3 720 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 GPR21Q99679 349 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 OLFM1Q99784 485 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 ROPN1BQ9BZX4 212 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-205ENST00000466897 ROPN1Q9HAT0 212 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-205ENST00000466897 EURLQ9NYK6 297 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.89□□□□□ -0.03
NPHP4-205ENST00000466897 TRMT6Q9UJA5 497 aaKnown RBP14.89□□□□□ -0.03
NPHP4-205ENST00000466897 DOLKQ9UPQ8 538 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 DNAJC16Q9Y2G8 782 aa14.89□□□□□ -0.03
NPHP4-205ENST00000466897 MTO1Q9Y2Z2 717 aaKnown RBP14.89□□□□□ -0.03
NPHP4-205ENST00000466897 ASCC3Q8N3C0 2202 aaKnown RBP14.88□□□□□ -0.03
NPHP4-205ENST00000466897 HMX2A2RU54 273 aa14.88□□□□□ -0.03
NPHP4-205ENST00000466897 CDH16O75309 829 aa14.88□□□□□ -0.03
NPHP4-205ENST00000466897 KRT37O76014 449 aa14.88□□□□□ -0.03
NPHP4-205ENST00000466897 WISP3O95389 354 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-205ENST00000466897 ENO3P13929 434 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-205ENST00000466897 CSRP3P50461 194 aa14.88□□□□□ -0.03
NPHP4-205ENST00000466897 TAS2R39P59534 338 aa14.88□□□□□ -0.03
NPHP4-205ENST00000466897 IL9RQ01113 521 aa14.88□□□□□ -0.03
NPHP4-205ENST00000466897 BOP1Q14137 746 aaKnown RBP14.88□□□□□ -0.03
NPHP4-205ENST00000466897 UAP1L1Q3KQV9 507 aa14.88□□□□□ -0.03
NPHP4-205ENST00000466897 C6orf132Q5T0Z8 1188 aa14.88□□□□□ -0.03
NPHP4-205ENST00000466897 ZCCHC8Q6NZY4 707 aaKnown RBP14.88□□□□□ -0.03
NPHP4-205ENST00000466897 OGFOD3Q6PK18 319 aa14.88□□□□□ -0.03
NPHP4-205ENST00000466897 C17orf82Q86X59 251 aaPredicted RBP14.88□□□□□ -0.03
NPHP4-205ENST00000466897 AVL9Q8NBF6 648 aa14.88□□□□□ -0.03
NPHP4-205ENST00000466897 GIMAP7Q8NHV1 300 aa14.88□□□□□ -0.03
NPHP4-205ENST00000466897 OR52A5Q9H2C5 316 aa14.88□□□□□ -0.03
NPHP4-205ENST00000466897 OSGEPL1Q9H4B0 414 aa14.88□□□□□ -0.03
NPHP4-205ENST00000466897 CAAP1Q9H8G2 361 aa14.88□□□□□ -0.03
NPHP4-205ENST00000466897 RXFP3Q9NSD7 469 aa14.88□□□□□ -0.03
NPHP4-205ENST00000466897 TBC1D29Q9UFV1 150 aa14.88□□□□□ -0.03
NPHP4-205ENST00000466897 NFS1Q9Y697 457 aa14.88□□□□□ -0.03
NPHP4-205ENST00000466897 UQCRHLA0A096LP55 91 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 KIR2DS5A0A0G2JLQ3 304 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 A0A0G2JNG1 304 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 IQANK1A0A1B0GTG1 560 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 KIR2DS3K7RE56 304 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 GFRA3O60609 400 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 UQCRHP07919 91 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 SNRPAP09012 282 aaKnown RBP14.87□□□□□ -0.03
NPHP4-205ENST00000466897 SLC35G4P0C7Q5 338 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 STMN1P16949 149 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 ZNF37AP17032 561 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-205ENST00000466897 ITGB6P18564 788 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 HALP42357 657 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 GRK6P43250 576 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 MAGEA12P43365 314 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 MAPK9P45984 424 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 SLC12A2P55011 1212 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 RAB10P61026 200 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 HSPA14Q0VDF9 509 aa14.87□□□□□ -0.03
NPHP4-205ENST00000466897 PDAP1Q13442 181 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms