RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 CCR10P46092 362 aa4.34□□□□□ -1.71
SMC4-205ENST00000465563 PPM1FP49593 454 aaPredicted RBP4.34□□□□□ -1.71
SMC4-205ENST00000465563 GAGE2BQ13066 116 aa4.34□□□□□ -1.71
SMC4-205ENST00000465563 GAGE2EQ4V326 116 aa4.34□□□□□ -1.71
SMC4-205ENST00000465563 GAGE2AQ6NT46 116 aa4.34□□□□□ -1.71
SMC4-205ENST00000465563 ZNF774Q6NX45 483 aa4.34□□□□□ -1.71
SMC4-205ENST00000465563 CYP20A1Q6UW02 462 aa4.34□□□□□ -1.71
SMC4-205ENST00000465563 HEATR4Q86WZ0 1026 aa4.34□□□□□ -1.71
SMC4-205ENST00000465563 CDC20BQ86Y33 519 aa4.34□□□□□ -1.71
SMC4-205ENST00000465563 LSMEM2Q8N112 164 aa4.34□□□□□ -1.71
SMC4-205ENST00000465563 TSPYL6Q8N831 410 aa4.34□□□□□ -1.71
SMC4-205ENST00000465563 ZUFSPQ96AP4 578 aa4.34□□□□□ -1.71
SMC4-205ENST00000465563 NUDCD1Q96RS6 583 aa4.34□□□□□ -1.71
SMC4-205ENST00000465563 PIGQQ9BRB3 760 aa4.34□□□□□ -1.71
SMC4-205ENST00000465563 CHMP4AQ9BY43 222 aa4.34□□□□□ -1.71
SMC4-205ENST00000465563 MBNL1Q9NR56 388 aaKnown RBP4.34□□□□□ -1.71
SMC4-205ENST00000465563 INTS9Q9NV88 658 aaKnown RBP4.34□□□□□ -1.71
SMC4-205ENST00000465563 GAGE2DQ9UEU5 116 aa4.34□□□□□ -1.71
SMC4-205ENST00000465563 KLK13Q9UKR3 277 aa4.34□□□□□ -1.71
SMC4-205ENST00000465563 LRRFIP2Q9Y608 721 aaKnown RBP4.34□□□□□ -1.71
SMC4-205ENST00000465563 ACADLP28330 430 aa4.33□□□□□ -1.72
SMC4-205ENST00000465563 KRTAP12-2P59991 146 aa4.33□□□□□ -1.72
SMC4-205ENST00000465563 LGALS3BPQ08380 585 aa4.33□□□□□ -1.72
SMC4-205ENST00000465563 NIPAL4Q0D2K0 466 aa4.33□□□□□ -1.72
SMC4-205ENST00000465563 PRKAA1Q13131 559 aa4.33□□□□□ -1.72
SMC4-205ENST00000465563 GPR17Q13304 367 aa4.33□□□□□ -1.72
SMC4-205ENST00000465563 SGSM1Q2NKQ1 1148 aa4.33□□□□□ -1.72
SMC4-205ENST00000465563 FASTKD1Q53R41 847 aaKnown RBP4.33□□□□□ -1.72
SMC4-205ENST00000465563 FAM109BQ6ICB4 259 aaPredicted RBP4.33□□□□□ -1.72
SMC4-205ENST00000465563 ZNF354CQ86Y25 554 aa4.33□□□□□ -1.72
SMC4-205ENST00000465563 EXOC8Q8IYI6 725 aa4.33□□□□□ -1.72
SMC4-205ENST00000465563 SUSD6Q92537 303 aa4.33□□□□□ -1.72
SMC4-205ENST00000465563 RRP36Q96EU6 259 aaKnown RBP4.33□□□□□ -1.72
SMC4-205ENST00000465563 NSL1Q96IY1 281 aa4.33□□□□□ -1.72
SMC4-205ENST00000465563 WDFY2Q96P53 400 aa4.33□□□□□ -1.72
SMC4-205ENST00000465563 PSMD1Q99460 953 aa4.33□□□□□ -1.72
SMC4-205ENST00000465563 LUZP4Q9P127 313 aa4.33□□□□□ -1.72
SMC4-205ENST00000465563 A0A1W2PNU3 283 aaPredicted RBP4.32□□□□□ -1.72
SMC4-205ENST00000465563 TMEM8BA6NDV4 472 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 ATP6V0E1O15342 81 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 PI15O43692 258 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 DUS4LO95620 317 aaKnown RBP4.32□□□□□ -1.72
SMC4-205ENST00000465563 BSGP35613 385 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 PSMC4P43686 418 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 GPR143P51810 404 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 GALCP54803 685 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 DHX8Q14562 1220 aaKnown RBP4.32□□□□□ -1.72
SMC4-205ENST00000465563 R3HCC1LQ7Z5L2 792 aaKnown RBP4.32□□□□□ -1.72
SMC4-205ENST00000465563 ZNF554Q86TJ5 538 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 GALNT13Q8IUC8 556 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 ARHGAP12Q8IWW6 846 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 LMNTD2Q8IXW0 634 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 OR2T11Q8NH01 316 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 HPSE2Q8WWQ2 592 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 FOXN4Q96NZ1 517 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 KRTAP4-3Q9BYR4 195 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 PDCL3Q9H2J4 239 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 RRP7BPQ9NSQ0 103 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 RNF186Q9NXI6 227 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 LIMA1Q9UHB6 759 aaKnown RBP4.32□□□□□ -1.72
SMC4-205ENST00000465563 TP53TG3Q9ULZ0 132 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 MOB4Q9Y3A3 225 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 PCNX3Q9H6A9 2034 aa4.32□□□□□ -1.72
SMC4-205ENST00000465563 ARID4BQ4LE39 1312 aaPredicted RBP4.31□□□□□ -1.72
SMC4-205ENST00000465563 FAM237BA0A1B0GVD1 139 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 A0A1W2PPH5 198 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.31□□□□□ -1.72
SMC4-205ENST00000465563 OGG1O15527 345 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 GPC4O75487 556 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 NKX2-1P43699 371 aaPredicted RBP4.31□□□□□ -1.72
SMC4-205ENST00000465563 LCE3AQ5TA76 89 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 BSPRYQ5W0U4 402 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 CORO6Q6QEF8 472 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 PAQR6Q6TCH4 344 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 GLDNQ6ZMI3 551 aaPredicted RBP4.31□□□□□ -1.72
SMC4-205ENST00000465563 LRRTM1Q86UE6 522 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 RAB42Q8N4Z0 105 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 FRMD1Q8N878 549 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 ETNPPLQ8TBG4 499 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 HSD17B8Q92506 261 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 ZKSCAN4Q969J2 545 aaPredicted RBP4.31□□□□□ -1.72
SMC4-205ENST00000465563 MYADMQ96S97 322 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 CLEC7AQ9BXN2 247 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 MYH16Q9H6N6 1097 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 SMC4Q9NTJ3 1288 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 PRR34Q9NV39 138 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 SAGE1Q9NXZ1 904 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 LRWD1Q9UFC0 647 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 KCNE2Q9Y6J6 123 aa4.31□□□□□ -1.72
SMC4-205ENST00000465563 MAGEA11P43364 429 aa4.3□□□□□ -1.72
SMC4-205ENST00000465563 KRTAP13-3Q3SY46 172 aa4.3□□□□□ -1.72
SMC4-205ENST00000465563 GLIPR1L2Q4G1C9 344 aa4.3□□□□□ -1.72
SMC4-205ENST00000465563 GORABQ5T7V8 394 aa4.3□□□□□ -1.72
SMC4-205ENST00000465563 ACSM2BQ68CK6 577 aa4.3□□□□□ -1.72
SMC4-205ENST00000465563 GALNT5Q7Z7M9 940 aa4.3□□□□□ -1.72
SMC4-205ENST00000465563 TMTC2Q8N394 836 aa4.3□□□□□ -1.72
SMC4-205ENST00000465563 PERPQ96FX8 193 aa4.3□□□□□ -1.72
SMC4-205ENST00000465563 MED19A0JLT2 244 aaPredicted RBP4.29□□□□□ -1.72
SMC4-205ENST00000465563 PIGNO95427 931 aa4.29□□□□□ -1.72
SMC4-205ENST00000465563 ACP2P11117 423 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms