RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 STRADBQ9C0K7 418 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 WWP1Q9H0M0 922 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 SAMD15Q9P1V8 674 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 COL27A1Q8IZC6 1860 aaPredicted RBP16.69■□□□□ 0.26
VPS52-215ENST00000464425 KIF26BQ2KJY2 2108 aa16.69■□□□□ 0.26
VPS52-215ENST00000464425 ESYT3A0FGR9 886 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 E7ESA3 106 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 TMX2-CTNND1H3BSU7 103 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 AP2A2O94973 939 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 CSF2RBP32927 897 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 NSG1P42857 185 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 LSSP48449 732 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 GPLD1P80108 840 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 ZFP36L1Q07352 338 aaKnown RBP16.68■□□□□ 0.26
VPS52-215ENST00000464425 ITIH4Q14624 930 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 RPE65Q16518 533 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 LYPLAL1Q5VWZ2 237 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 XKR5Q6UX68 686 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 ZDHHC24Q6UX98 284 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 TMEM26Q6ZUK4 368 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 TMEM135Q86UB9 458 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 SLITRK4Q8IW52 837 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 AGGF1Q8N302 714 aaeCLIP16.68■□□□□ 0.26
VPS52-215ENST00000464425 AVL9Q8NBF6 648 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 SPDYE1Q8NFV5 336 aaPredicted RBP16.68■□□□□ 0.26
VPS52-215ENST00000464425 WDR36Q8NI36 951 aaKnown RBP16.68■□□□□ 0.26
VPS52-215ENST00000464425 FBXO25Q8TCJ0 367 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 INSM2Q96T92 566 aaPredicted RBP16.68■□□□□ 0.26
VPS52-215ENST00000464425 TTC1Q99614 292 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 TRIM56Q9BRZ2 755 aaKnown RBP16.68■□□□□ 0.26
VPS52-215ENST00000464425 POLR1BQ9H9Y6 1135 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 CATSPERZQ9NTU4 200 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 ZDHHC18Q9NUE0 388 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 TMEM9Q9P0T7 183 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 MARCH4Q9P2E8 410 aaPredicted RBP16.68■□□□□ 0.26
VPS52-215ENST00000464425 ACSL5Q9ULC5 683 aa16.68■□□□□ 0.26
VPS52-215ENST00000464425 CFAP20Q9Y6A4 193 aaKnown RBP16.68■□□□□ 0.26
VPS52-215ENST00000464425 APC2O95996 2303 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 CCDC187A0A096LP49 1063 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 IGHV5-10-1A0A0J9YXX1 117 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 KLHL33A6NCF5 533 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 GOLGA8KD6RF30 607 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 GOLGA8TH3BQL2 631 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 EIF3HO15372 352 aaKnown RBP eCLIP16.67■□□□□ 0.26
VPS52-215ENST00000464425 CD3EAPO15446 510 aaKnown RBP16.67■□□□□ 0.26
VPS52-215ENST00000464425 DUX1O43812 170 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 VAPBO95292 243 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 HGFP14210 728 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 TYRP1P17643 537 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 CCKBRP32239 447 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 DHX9Q08211 1270 aaKnown RBP16.67■□□□□ 0.26
VPS52-215ENST00000464425 CUL1Q13616 776 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 MSS51Q4VC12 460 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 CERS6Q6ZMG9 384 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 CENPUQ71F23 418 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 PROSER1Q86XN7 944 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 IFT20Q8IY31 132 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 FBXO39Q8N4B4 442 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 OTUD6BQ8N6M0 293 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 HM13Q8TCT9 377 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 JPH3Q8WXH2 748 aaPredicted RBP16.67■□□□□ 0.26
VPS52-215ENST00000464425 NCSTNQ92542 709 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 STAMBPL1Q96FJ0 436 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 C12orf66Q96MD2 445 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 EBNA1BP2Q99848 306 aaKnown RBP16.67■□□□□ 0.26
VPS52-215ENST00000464425 VPS37BQ9H9H4 285 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 SLC40A1Q9NP59 571 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 POT1Q9NUX5 634 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 IMP3Q9NV31 184 aaKnown RBP16.67■□□□□ 0.26
VPS52-215ENST00000464425 DKK4Q9UBT3 224 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 RAXQ9Y2V3 346 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 EPG5Q9HCE0 2579 aa16.67■□□□□ 0.26
VPS52-215ENST00000464425 C17orf113A0A1B0GUU1 675 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 USP1O94782 785 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 TTC4O95801 387 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 RHOXF2BP0C7M4 288 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 SLC35G4P0C7Q5 338 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 ARNTP27540 789 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 EPHA4P54764 986 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 ACACAQ13085 2346 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 SQSTM1Q13501 440 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 GPR18Q14330 331 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 CLPPQ16740 277 aaPredicted RBP16.66■□□□□ 0.26
VPS52-215ENST00000464425 BBS9Q3SYG4 887 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 SNAP47Q5SQN1 464 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 DUS1LQ6P1R4 473 aaKnown RBP16.66■□□□□ 0.26
VPS52-215ENST00000464425 PACS1Q6VY07 963 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 RAB11FIP2Q7L804 512 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 RCBTB1Q8NDN9 531 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 OR4D9Q8NGE8 314 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 GPR150Q8NGU9 434 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 LIN37Q96GY3 246 aaPredicted RBP16.66■□□□□ 0.26
VPS52-215ENST00000464425 PRR11Q96HE9 360 aaPredicted RBP16.66■□□□□ 0.26
VPS52-215ENST00000464425 CCDC74BQ96LY2 380 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 RMDN2Q96LZ7 410 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 PWWP2AQ96N64 755 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 RHOXF2Q9BQY4 288 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 TSPYL1Q9H0U9 437 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 COG4Q9H9E3 785 aa16.66■□□□□ 0.26
VPS52-215ENST00000464425 UCK1Q9HA47 277 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms