RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 CD72P21854 359 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 PTPN5P54829 565 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 ATP6V0D1P61421 351 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 BLMHQ13867 455 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 TSNQ15631 228 aaKnown RBP14.3□□□□□ -0.12
COL5A1-205ENST00000464187 CHRNA6Q15825 494 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 ZNF423Q2M1K9 1284 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 SLC44A4Q53GD3 710 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 ZDHHC20Q5W0Z9 365 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 KIAA1211LQ6NV74 962 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 LARP4Q71RC2 724 aaKnown RBP eCLIP14.3□□□□□ -0.12
COL5A1-205ENST00000464187 ERN2Q76MJ5 926 aaKnown RBP14.3□□□□□ -0.12
COL5A1-205ENST00000464187 HSD11B1LQ7Z5J1 315 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 FAM3CQ92520 227 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 C19orf60Q96EN9 201 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 C3orf30Q96M34 536 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 PLEKHG4BQ96PX9 1271 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 ASB2Q96Q27 587 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 CDRT15Q96T59 188 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 SERPINI1Q99574 410 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 ZNF184Q99676 751 aaPredicted RBP14.3□□□□□ -0.12
COL5A1-205ENST00000464187 GABRG3Q99928 467 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 PRDM6Q9NQX0 595 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 PKD2L2Q9NZM6 624 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 CD84Q9UIB8 345 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 VPS9D1Q9Y2B5 631 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 LRCH1Q9Y2L9 728 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 MYO10Q9HD67 2058 aa14.3□□□□□ -0.12
COL5A1-205ENST00000464187 H3BNX3 289 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 CDC7O00311 574 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 AREL1O15033 823 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 PFDN6O15212 129 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 SPINT1O43278 529 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 ADAM23O75077 832 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 ELFN1P0C7U0 828 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 UGT1A6P19224 532 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 UGT1A1P22309 533 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 UGT1A4P22310 534 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 EEF1DP29692 281 aaKnown RBP14.29□□□□□ -0.12
COL5A1-205ENST00000464187 UGT1A3P35503 534 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 UGT1A5P35504 534 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 PKNOX1P55347 436 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 ART3Q13508 389 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 FASTKQ14296 549 aaKnown RBP14.29□□□□□ -0.12
COL5A1-205ENST00000464187 STARD3Q14849 445 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 CST6Q15828 149 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 LIPIQ6XZB0 460 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 CERS6Q6ZMG9 384 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 KBTBD6Q86V97 674 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 CLYBLQ8N0X4 340 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 SIDT2Q8NBJ9 832 aaKnown RBP14.29□□□□□ -0.12
COL5A1-205ENST00000464187 STAG3L4Q8TBR4 150 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.29□□□□□ -0.12
COL5A1-205ENST00000464187 MSANTD3Q96H12 275 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 MRGBPQ9NV56 204 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 PLXNB3Q9ULL4 1909 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 TRBV5-4A0A0C4DH59 114 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 H0Y858 1186 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 STX16-NPEPL1H3BU86 382 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 PSMD12O00232 456 aaPredicted RBP14.29□□□□□ -0.12
COL5A1-205ENST00000464187 LIN7AO14910 233 aaPredicted RBP14.29□□□□□ -0.12
COL5A1-205ENST00000464187 MID1O15344 667 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 CFLARO15519 480 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 VPS26AO75436 327 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 KLF8O95600 359 aaPredicted RBP14.29□□□□□ -0.12
COL5A1-205ENST00000464187 TSPAN12O95859 305 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 PYGLP06737 847 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 FGF4P08620 206 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 HOXB2P14652 356 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 XRCC1P18887 633 aaPredicted RBP14.29□□□□□ -0.12
COL5A1-205ENST00000464187 CD9P21926 228 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 CA5AP35218 305 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 ETV3P41162 512 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 P2RY2P41231 377 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 FOXA1P55317 472 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 MRPS21P82921 87 aaKnown RBP14.29□□□□□ -0.12
COL5A1-205ENST00000464187 ELP6Q0PNE2 266 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 CNTN1Q12860 1018 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 CEACAM7Q14002 265 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 MAPRE2Q15555 327 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 KANK2Q63ZY3 851 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 IZUMO2Q6UXV1 221 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 Q6ZVL8 140 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 TRMT11Q7Z4G4 463 aaKnown RBP14.29□□□□□ -0.12
COL5A1-205ENST00000464187 FBXO39Q8N4B4 442 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 NKAPQ8N5F7 415 aaKnown RBP14.29□□□□□ -0.12
COL5A1-205ENST00000464187 SNX31Q8N9S9 440 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 OR2T3Q8NH03 318 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 CD200R1Q8TD46 325 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 FUBP1Q96AE4 644 aaKnown RBP14.29□□□□□ -0.12
COL5A1-205ENST00000464187 WRAP53Q9BUR4 548 aaKnown RBP14.29□□□□□ -0.12
COL5A1-205ENST00000464187 HDAC8Q9BY41 377 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 MKRN2Q9H000 416 aaKnown RBP14.29□□□□□ -0.12
COL5A1-205ENST00000464187 YY1AP1Q9H869 796 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 MID1IP1Q9NPA3 183 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 TRMT6Q9UJA5 497 aaKnown RBP14.29□□□□□ -0.12
COL5A1-205ENST00000464187 ADAMTS6Q9UKP5 1117 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 DUSP12Q9UNI6 340 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 DNAJC15Q9Y5T4 150 aa14.29□□□□□ -0.12
COL5A1-205ENST00000464187 PTGDR2Q9Y5Y4 395 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms