RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 KCNJ1P48048 391 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 CSNK1EP49674 416 aaKnown RBP5.69□□□□□ -1.5
VPS36-202ENST00000462289 KRTAP10-2P60368 255 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 OLIG2Q13516 323 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 PTK6Q13882 451 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 GALNT3Q14435 633 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 NFATC4Q14934 902 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 TAF1AQ15573 450 aaPredicted RBP5.69□□□□□ -1.5
VPS36-202ENST00000462289 LONRF2Q1L5Z9 754 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 ZDHHC20Q5W0Z9 365 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 KCTD16Q68DU8 428 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 CCDC137Q6PK04 289 aaKnown RBP5.69□□□□□ -1.5
VPS36-202ENST00000462289 LSRQ86X29 649 aaPredicted RBP5.69□□□□□ -1.5
VPS36-202ENST00000462289 C17orf82Q86X59 251 aaPredicted RBP5.69□□□□□ -1.5
VPS36-202ENST00000462289 JAMLQ86YT9 394 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 NDUFAF2Q8N183 169 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 SDR16C5Q8N3Y7 309 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 RYBPQ8N488 228 aaPredicted RBP5.69□□□□□ -1.5
VPS36-202ENST00000462289 DEFB119Q8N690 84 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 NAT8LQ8N9F0 302 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 SYT8Q8NBV8 401 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 PLA2G15Q8NCC3 412 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 GPR26Q8NDV2 337 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 LPCAT1Q8NF37 534 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 CXorf40AQ8TE69 158 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 CPT1BQ92523 772 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 PTCHD1Q96NR3 888 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 ELF4Q99607 663 aaPredicted RBP5.69□□□□□ -1.5
VPS36-202ENST00000462289 FERMT1Q9BQL6 677 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 NUSAP1Q9BXS6 441 aaKnown RBP5.69□□□□□ -1.5
VPS36-202ENST00000462289 ABCG8Q9H221 673 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 SMOC1Q9H4F8 434 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 MRM3Q9HC36 420 aaKnown RBP5.69□□□□□ -1.5
VPS36-202ENST00000462289 IL26Q9NPH9 171 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 TREX1Q9NSU2 369 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.69□□□□□ -1.5
VPS36-202ENST00000462289 VPS18Q9P253 973 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 NCDNQ9UBB6 729 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 ZNF148Q9UQR1 794 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 COQ6Q9Y2Z9 468 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 SF3B6Q9Y3B4 125 aaKnown RBP5.69□□□□□ -1.5
VPS36-202ENST00000462289 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.69□□□□□ -1.5
VPS36-202ENST00000462289 CSNK1G3Q9Y6M4 447 aa5.69□□□□□ -1.5
VPS36-202ENST00000462289 AKAP13Q12802 2813 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 ACACBO00763 2458 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 SNRNP200O75643 2136 aaKnown RBP5.68□□□□□ -1.5
VPS36-202ENST00000462289 LY6G6EA0A0G2JKS1 128 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 C1orf232A0A0U1RR37 186 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 A6NCN8 305 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 FAM47DPA6NHR8 397 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 GPR89AB7ZAQ6 455 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 KIF2AO00139 706 aaPredicted RBP5.68□□□□□ -1.5
VPS36-202ENST00000462289 FPGTO14772 594 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 TPP1O14773 563 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 SGTAO43765 313 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 DNAJC6O75061 913 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 PIAS2O75928 621 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 TMEM63AO94886 807 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 CER1O95813 267 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 IVLP07476 585 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 ZSCAN5DPP0CG00 497 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 GPR89BP0CG08 455 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 THEGLP0DJG4 465 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 MYCLP1P12525 358 aaPredicted RBP5.68□□□□□ -1.5
VPS36-202ENST00000462289 ETS1P14921 441 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 IFNGR1P15260 489 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 CTPS1P17812 591 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 MAT2AP31153 395 aaKnown RBP5.68□□□□□ -1.5
VPS36-202ENST00000462289 CA5AP35218 305 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 GRIA1P42261 906 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 CLCNKAP51800 687 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 DRG2P55039 364 aaKnown RBP5.68□□□□□ -1.5
VPS36-202ENST00000462289 CLDN2P57739 230 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 FAM193AP78312 1265 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 CDK3Q00526 305 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 POU4F1Q01851 419 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 SGCGQ13326 291 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 PEX6Q13608 980 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 TUBB2AQ13885 445 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 COL9A2Q14055 689 aaPredicted RBP5.68□□□□□ -1.5
VPS36-202ENST00000462289 STAT4Q14765 748 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 HLA-BQ31612 363 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 RNASEH2BQ5TBB1 312 aaKnown RBP5.68□□□□□ -1.5
VPS36-202ENST00000462289 STPG1Q5TH74 334 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 CCDC181Q5TID7 509 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 LAYNQ6UX15 382 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 KDM7AQ6ZMT4 941 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 Q6ZSR6 202 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 ARHGEF18Q6ZSZ5 1173 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 ADAT2Q7Z6V5 191 aaKnown RBP5.68□□□□□ -1.5
VPS36-202ENST00000462289 C11orf96Q7Z7L8 435 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 PRUNE1Q86TP1 453 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 LINC00523Q86TU6 105 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 CAND1Q86VP6 1230 aaKnown RBP5.68□□□□□ -1.5
VPS36-202ENST00000462289 HOOK3Q86VS8 718 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 PARGQ86W56 976 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 SLC25A45Q8N413 288 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 MINDY1Q8N5J2 469 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 TRAM1L1Q8N609 369 aa5.68□□□□□ -1.5
VPS36-202ENST00000462289 DDHD1Q8NEL9 900 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms