RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 G3BP2Q9UN86 482 aaKnown RBP8.68□□□□□ -1.02
LDB1-203ENST00000461873 ZNF148Q9UQR1 794 aa8.68□□□□□ -1.02
LDB1-203ENST00000461873 CFAP20Q9Y6A4 193 aaKnown RBP8.68□□□□□ -1.02
LDB1-203ENST00000461873 ITPR1Q14643 2758 aa8.68□□□□□ -1.02
LDB1-203ENST00000461873 SDK2Q58EX2 2172 aa8.68□□□□□ -1.02
LDB1-203ENST00000461873 TLCD2A6NGC4 264 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 ERI2A8K979 691 aaKnown RBP8.67□□□□□ -1.02
LDB1-203ENST00000461873 KIAA0754O94854 1291 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 FTH1P02794 183 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 KLK3P07288 261 aaPredicted RBP8.67□□□□□ -1.02
LDB1-203ENST00000461873 GSTM1P09488 218 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 PLA2G2AP14555 144 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 BRAFP15056 766 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 LEPRP48357 1165 aaKnown RBP8.67□□□□□ -1.02
LDB1-203ENST00000461873 CTSCP53634 463 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 HSD11B2P80365 405 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 GSTM4Q03013 218 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 KCNC4Q03721 635 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 CACNG1Q06432 222 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 SRSF6Q13247 344 aaKnown RBP8.67□□□□□ -1.02
LDB1-203ENST00000461873 TUBB3Q13509 450 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 PTPRCAPQ14761 206 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 POU6F1Q14863 301 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 BCL7AQ4VC05 210 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 KHDC1Q4VXA5 237 aaKnown RBP8.67□□□□□ -1.02
LDB1-203ENST00000461873 LYPLAL1Q5VWZ2 237 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 TMEM126BQ8IUX1 230 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 LRRC8AQ8IWT6 810 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 UNC5BQ8IZJ1 945 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 NXPE1Q8N323 547 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 GALNT6Q8NCL4 622 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 OR13C4Q8NGS5 318 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 HM13Q8TCT9 377 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 STYXQ8WUJ0 223 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 APOBEC4Q8WW27 367 aaKnown RBP8.67□□□□□ -1.02
LDB1-203ENST00000461873 MAIP1Q8WWC4 291 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 LCN9Q8WX39 176 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 AHCTF1Q8WYP5 2266 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 STARD8Q92502 1023 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 RSC1A1Q92681 617 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 TRIM44Q96DX7 344 aaPredicted RBP8.67□□□□□ -1.02
LDB1-203ENST00000461873 SLC45A3Q96JT2 553 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 C19orf43Q9BQ61 176 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 DESI2Q9BSY9 194 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 TMEM121Q9BTD3 319 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 LACRTQ9GZZ8 138 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 RAB33BQ9H082 229 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 SLC25A18Q9H1K4 315 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 SRMSQ9H3Y6 488 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 FAM96AQ9H5X1 160 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 APMAPQ9HDC9 416 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 ZDHHC3Q9NYG2 299 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 SMARCAL1Q9NZC9 954 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 EPHA6Q9UF33 1036 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 PACSIN2Q9UNF0 486 aaPredicted RBP8.67□□□□□ -1.02
LDB1-203ENST00000461873 WDR37Q9Y2I8 494 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 TMEM184BQ9Y519 407 aaPredicted RBP8.67□□□□□ -1.02
LDB1-203ENST00000461873 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.67□□□□□ -1.02
LDB1-203ENST00000461873 RPS6KL1Q9Y6S9 549 aa8.67□□□□□ -1.02
LDB1-203ENST00000461873 C17orf113A0A1B0GUU1 675 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 PIPSLA2A3N6 862 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 CCDC78A2IDD5 438 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 HEATR9A2RTY3 570 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 OR6C74A6NCV1 312 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 RCCD1A6NED2 376 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 OR5K3A6NET4 321 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 AP3B1O00203 1094 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 PFDN6O15212 129 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 GPR39O43194 453 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 SPAG6O75602 509 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 C1QL1O75973 258 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 AP2A2O94973 939 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 ZBTB11O95625 1053 aaPredicted RBP8.66□□□□□ -1.02
LDB1-203ENST00000461873 OR56A5P0C7T3 313 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 TPH1P17752 444 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 NELFEP18615 380 aaKnown RBP8.66□□□□□ -1.02
LDB1-203ENST00000461873 FDFT1P37268 417 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 NSG1P42857 185 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 POLE2P56282 527 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 SH3BP2P78314 561 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 PRAMEP78395 509 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 CDH17Q12864 832 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 KCNAB2Q13303 367 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 RPS6KA1Q15418 735 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 DEFB109BQ30KR1 87 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.66□□□□□ -1.02
LDB1-203ENST00000461873 AADACL2Q6P093 401 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 C11orf96Q7Z7L8 435 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 CARFQ8N187 725 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 C17orf53Q8N3J3 647 aaPredicted RBP8.66□□□□□ -1.02
LDB1-203ENST00000461873 TAB3Q8N5C8 712 aaPredicted RBP8.66□□□□□ -1.02
LDB1-203ENST00000461873 OTUD6BQ8N6M0 293 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 BMPERQ8N8U9 685 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 ACVR1CQ8NER5 493 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 OR4E2Q8NGC2 313 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 OR6P1Q8NGX9 317 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 OR8K5Q8NH50 307 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 ELMO1Q92556 727 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 PMEPA1Q969W9 287 aa8.66□□□□□ -1.02
LDB1-203ENST00000461873 CLIP3Q96DZ5 547 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms