RNA–Protein interactions for RNA: ENST00000461540.2

CCT4-203, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 3

Gene CCT4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-203ENST00000461540 RNF168Q8IYW5 571 aaPredicted RBP3.39□□□□□ -1.87
CCT4-203ENST00000461540 RBFAQ8N0V3 343 aa3.39□□□□□ -1.87
CCT4-203ENST00000461540 POC1AQ8NBT0 407 aa3.39□□□□□ -1.87
CCT4-203ENST00000461540 N4BP2L2Q92802 583 aaPredicted RBP3.39□□□□□ -1.87
CCT4-203ENST00000461540 LRRC59Q96AG4 307 aaKnown RBP3.39□□□□□ -1.87
CCT4-203ENST00000461540 PABPC5Q96DU9 382 aaKnown RBP3.39□□□□□ -1.87
CCT4-203ENST00000461540 TEFMQ96QE5 360 aaKnown RBP3.39□□□□□ -1.87
CCT4-203ENST00000461540 PRAM1Q96QH2 718 aa3.39□□□□□ -1.87
CCT4-203ENST00000461540 CDRT15Q96T59 188 aa3.39□□□□□ -1.87
CCT4-203ENST00000461540 UTP14AQ9BVJ6 771 aaKnown RBP3.39□□□□□ -1.87
CCT4-203ENST00000461540 GLIS2Q9BZE0 524 aaPredicted RBP3.39□□□□□ -1.87
CCT4-203ENST00000461540 ABCG8Q9H221 673 aa3.39□□□□□ -1.87
CCT4-203ENST00000461540 DENND2DQ9H6A0 471 aaPredicted RBP3.39□□□□□ -1.87
CCT4-203ENST00000461540 GAREM1Q9H706 876 aa3.39□□□□□ -1.87
CCT4-203ENST00000461540 PIH1D3Q9NQM4 214 aaKnown RBP3.39□□□□□ -1.87
CCT4-203ENST00000461540 CHCHD3Q9NX63 227 aaKnown RBP3.39□□□□□ -1.87
CCT4-203ENST00000461540 GDE1Q9NZC3 331 aa3.39□□□□□ -1.87
CCT4-203ENST00000461540 CWC15Q9P013 229 aaKnown RBP3.39□□□□□ -1.87
CCT4-203ENST00000461540 TBK1Q9UHD2 729 aa3.39□□□□□ -1.87
CCT4-203ENST00000461540 RABL2BQ9UNT1 228 aa3.39□□□□□ -1.87
CCT4-203ENST00000461540 EXO1Q9UQ84 846 aaKnown RBP3.39□□□□□ -1.87
CCT4-203ENST00000461540 CARD8Q9Y2G2 431 aa3.39□□□□□ -1.87
CCT4-203ENST00000461540 KCNK7Q9Y2U2 307 aa3.39□□□□□ -1.87
CCT4-203ENST00000461540 SMAD5-AS1Q9Y6J3 95 aa3.39□□□□□ -1.87
CCT4-203ENST00000461540 IKBKGQ9Y6K9 419 aa3.39□□□□□ -1.87
CCT4-203ENST00000461540 IGLV5-37A0A075B6J1 123 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 FAM237AA0A1B0GTK4 181 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 TARSL2A2RTX5 802 aaKnown RBP3.38□□□□□ -1.87
CCT4-203ENST00000461540 TYW5A2RUC4 315 aaKnown RBP3.38□□□□□ -1.87
CCT4-203ENST00000461540 HTR3EA5X5Y0 456 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 ANXA2P2A6NMY6 339 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 H3BQ06 376 aaPredicted RBP3.38□□□□□ -1.87
CCT4-203ENST00000461540 SLC33A1O00400 549 aaPredicted RBP3.38□□□□□ -1.87
CCT4-203ENST00000461540 OGG1O15527 345 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 LMX1BO60663 402 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 RTN2O75298 545 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 OLFM2O95897 454 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 VPREB1P12018 145 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 IL10P22301 178 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 SLC12A3P55017 1021 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 STX1BP61266 288 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 ITGA7Q13683 1181 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 CAPSQ13938 189 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 KRT33BQ14525 404 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 ZNF273Q14593 569 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 LASP1Q14847 261 aaKnown RBP3.38□□□□□ -1.87
CCT4-203ENST00000461540 RPE65Q16518 533 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 ME3Q16798 604 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 ZRANB3Q5FWF4 1079 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 CXorf66Q5JRM2 361 aaPredicted RBP3.38□□□□□ -1.87
CCT4-203ENST00000461540 DHRS7BQ6IAN0 325 aaPredicted RBP3.38□□□□□ -1.87
CCT4-203ENST00000461540 MOXD1Q6UVY6 613 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 CLEC17AQ6ZS10 378 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 SH2D6Q7Z4S9 175 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 CENPVQ7Z7K6 275 aaPredicted RBP3.38□□□□□ -1.87
CCT4-203ENST00000461540 AACSQ86V21 672 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 CEP57Q86XR8 500 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 TMC8Q8IU68 726 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 LURAP1LQ8IV03 231 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 DHX40Q8IX18 779 aaKnown RBP3.38□□□□□ -1.87
CCT4-203ENST00000461540 SCYL3Q8IZE3 742 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 ZCCHC9Q8N567 271 aaKnown RBP3.38□□□□□ -1.87
CCT4-203ENST00000461540 PTPMT1Q8WUK0 201 aaPredicted RBP3.38□□□□□ -1.87
CCT4-203ENST00000461540 CORO2AQ92828 525 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 BICD1Q96G01 975 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 ZC3HAV1LQ96H79 300 aaKnown RBP3.38□□□□□ -1.87
CCT4-203ENST00000461540 HARBI1Q96MB7 349 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 CEP295NLQ96MC4 621 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 ZNF558Q96NG5 402 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 DACH2Q96NX9 599 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 IL17FQ96PD4 163 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 TSGA13Q96PP4 275 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 NUDCD1Q96RS6 583 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 EGFL8Q99944 293 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 ANP32EQ9BTT0 268 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 KRT23Q9C075 422 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 MMP27Q9H306 513 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 BPIFA1Q9NP55 256 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 HAO2Q9NYQ3 351 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 XPO7Q9UIA9 1087 aaKnown RBP3.38□□□□□ -1.87
CCT4-203ENST00000461540 LEF1Q9UJU2 399 aaPredicted RBP3.38□□□□□ -1.87
CCT4-203ENST00000461540 CDH7Q9ULB5 785 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 ZNF148Q9UQR1 794 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 CHKBQ9Y259 395 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 CLDN16Q9Y5I7 305 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 LIPGQ9Y5X9 500 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 AP1M2Q9Y6Q5 423 aa3.38□□□□□ -1.87
CCT4-203ENST00000461540 SPAG9O60271 1321 aaKnown RBP3.38□□□□□ -1.87
CCT4-203ENST00000461540 LNP1A1A4G5 178 aa3.37□□□□□ -1.87
CCT4-203ENST00000461540 MAGEA13PA6NCF6 341 aa3.37□□□□□ -1.87
CCT4-203ENST00000461540 OOEPA6NGQ2 149 aa3.37□□□□□ -1.87
CCT4-203ENST00000461540 ENO4A6NNW6 628 aa3.37□□□□□ -1.87
CCT4-203ENST00000461540 NPIPB11E5RHQ5 1161 aa3.37□□□□□ -1.87
CCT4-203ENST00000461540 CCDC188H7C350 402 aa3.37□□□□□ -1.87
CCT4-203ENST00000461540 PLOD2O00469 737 aa3.37□□□□□ -1.87
CCT4-203ENST00000461540 IFIT3O14879 490 aaKnown RBP3.37□□□□□ -1.87
CCT4-203ENST00000461540 NOL3O60936 208 aaKnown RBP3.37□□□□□ -1.87
CCT4-203ENST00000461540 SIX3O95343 332 aaPredicted RBP3.37□□□□□ -1.87
CCT4-203ENST00000461540 HIST1H2ABP04908 130 aa3.37□□□□□ -1.87
CCT4-203ENST00000461540 ANXA7P20073 488 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms