RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 CRYL1Q9Y2S2 319 aa22.03■■□□□ 1.12
C9orf3-209ENST00000460573 U3KQA8 63 aa22.03■■□□□ 1.12
C9orf3-209ENST00000460573 PTPRBP23467 1997 aa22.03■■□□□ 1.12
C9orf3-209ENST00000460573 PDZK1P1A8MUH7 402 aa22.02■■□□□ 1.12
C9orf3-209ENST00000460573 GP1BAP07359 652 aa22.02■■□□□ 1.12
C9orf3-209ENST00000460573 SSTR1P30872 391 aa22.02■■□□□ 1.12
C9orf3-209ENST00000460573 HALP42357 657 aa22.02■■□□□ 1.12
C9orf3-209ENST00000460573 SLMAPQ14BN4 828 aa22.02■■□□□ 1.12
C9orf3-209ENST00000460573 ZNF658BQ4V348 819 aaPredicted RBP22.02■■□□□ 1.12
C9orf3-209ENST00000460573 TRMT10BQ6PF06 316 aaKnown RBP22.02■■□□□ 1.12
C9orf3-209ENST00000460573 SLC9B2Q86UD5 537 aa22.02■■□□□ 1.12
C9orf3-209ENST00000460573 MAPK15Q8TD08 544 aa22.02■■□□□ 1.12
C9orf3-209ENST00000460573 ELMO1Q92556 727 aa22.02■■□□□ 1.12
C9orf3-209ENST00000460573 STN1Q9H668 368 aaKnown RBP22.02■■□□□ 1.12
C9orf3-209ENST00000460573 CCDC86Q9H6F5 360 aaKnown RBP22.02■■□□□ 1.12
C9orf3-209ENST00000460573 COG4Q9H9E3 785 aa22.02■■□□□ 1.12
C9orf3-209ENST00000460573 LRRC4CQ9HCJ2 640 aa22.02■■□□□ 1.12
C9orf3-209ENST00000460573 FBXO6Q9NRD1 293 aaPredicted RBP22.02■■□□□ 1.12
C9orf3-209ENST00000460573 NFU1Q9UMS0 254 aa22.02■■□□□ 1.12
C9orf3-209ENST00000460573 PCDHGA1Q9Y5H4 931 aa22.02■■□□□ 1.12
C9orf3-209ENST00000460573 BPTFQ12830 3046 aa22.02■■□□□ 1.12
C9orf3-209ENST00000460573 ZFC3H1O60293 1989 aaKnown RBP22.01■■□□□ 1.11
C9orf3-209ENST00000460573 FAM221BA6H8Z2 402 aa22.01■■□□□ 1.11
C9orf3-209ENST00000460573 NUDT21O43809 227 aaKnown RBP22.01■■□□□ 1.11
C9orf3-209ENST00000460573 PKMP14618 531 aaKnown RBP22.01■■□□□ 1.11
C9orf3-209ENST00000460573 PNLIPP16233 465 aa22.01■■□□□ 1.11
C9orf3-209ENST00000460573 GLB1P16278 677 aa22.01■■□□□ 1.11
C9orf3-209ENST00000460573 XRCC1P18887 633 aaPredicted RBP22.01■■□□□ 1.11
C9orf3-209ENST00000460573 RPL10P27635 214 aaKnown RBP22.01■■□□□ 1.11
C9orf3-209ENST00000460573 FMO4P31512 558 aa22.01■■□□□ 1.11
C9orf3-209ENST00000460573 ZNF789Q5FWF6 425 aa22.01■■□□□ 1.11
C9orf3-209ENST00000460573 FAM83HQ6ZRV2 1179 aaPredicted RBP22.01■■□□□ 1.11
C9orf3-209ENST00000460573 SLC26A11Q86WA9 606 aa22.01■■□□□ 1.11
C9orf3-209ENST00000460573 ARL14Q8N4G2 192 aa22.01■■□□□ 1.11
C9orf3-209ENST00000460573 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.01■■□□□ 1.117e-7■■■■■ 60.5
C9orf3-209ENST00000460573 KMT2BQ9UMN6 2715 aaPredicted RBP22■■□□□ 1.11
C9orf3-209ENST00000460573 ZW10O43264 779 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 HAUS5O94927 633 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 EML2O95834 649 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 TNFRSF8P28908 595 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 STX2P32856 288 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 PHBP35232 272 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 FASLGP48023 281 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 ACADVLP49748 655 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 GPX6P59796 221 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 DNAJC3Q13217 504 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 BIRC2Q13490 618 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 CTSL3PQ5NE16 218 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 DHRS13Q6UX07 377 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 CCNI2Q6ZMN8 369 aaPredicted RBP22■■□□□ 1.11
C9orf3-209ENST00000460573 CAPN12Q6ZSI9 719 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 TMPRSS7Q7RTY8 843 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 ASZ1Q8WWH4 475 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 SH3KBP1Q96B97 665 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 SARS2Q9NP81 518 aaKnown RBP22■■□□□ 1.11
C9orf3-209ENST00000460573 TOR4AQ9NXH8 423 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 CORO1CQ9ULV4 474 aaPredicted RBP22■■□□□ 1.11
C9orf3-209ENST00000460573 USP24Q9UPU5 2620 aa22■■□□□ 1.11
C9orf3-209ENST00000460573 TCRBV9S1A1TA0A576 114 aa21.99■■□□□ 1.11
C9orf3-209ENST00000460573 CPED1A4D0V7 1026 aa21.99■■□□□ 1.11
C9orf3-209ENST00000460573 SRRM3A6NNA2 597 aaPredicted RBP21.99■■□□□ 1.11
C9orf3-209ENST00000460573 AHSGP02765 367 aa21.99■■□□□ 1.11
C9orf3-209ENST00000460573 APOA4P06727 396 aa21.99■■□□□ 1.11
C9orf3-209ENST00000460573 SLC35G4P0C7Q5 338 aa21.99■■□□□ 1.11
C9orf3-209ENST00000460573 AOAHP28039 575 aa21.99■■□□□ 1.11
C9orf3-209ENST00000460573 CD151P48509 253 aa21.99■■□□□ 1.11
C9orf3-209ENST00000460573 MPP1Q00013 466 aa21.99■■□□□ 1.11
C9orf3-209ENST00000460573 TMED2Q15363 201 aa21.99■■□□□ 1.11
C9orf3-209ENST00000460573 SEPT7Q16181 437 aaKnown RBP21.99■■□□□ 1.11
C9orf3-209ENST00000460573 SYTL3Q4VX76 610 aa21.99■■□□□ 1.11
C9orf3-209ENST00000460573 RBM12BQ8IXT5 1001 aaKnown RBP21.99■■□□□ 1.11
C9orf3-209ENST00000460573 SLC37A2Q8TED4 501 aa21.99■■□□□ 1.11
C9orf3-209ENST00000460573 PATE1Q8WXA2 126 aa21.99■■□□□ 1.11
C9orf3-209ENST00000460573 UBXN4Q92575 508 aa21.99■■□□□ 1.11
C9orf3-209ENST00000460573 TMEM159Q96B96 161 aa21.99■■□□□ 1.11
C9orf3-209ENST00000460573 LATS2Q9NRM7 1088 aa21.99■■□□□ 1.11
C9orf3-209ENST00000460573 LRIT1Q9P2V4 623 aa21.99■■□□□ 1.11
C9orf3-209ENST00000460573 FAM8A1Q9UBU6 413 aa21.99■■□□□ 1.11
C9orf3-209ENST00000460573 GOLGA4Q13439 2230 aaKnown RBP21.98■■□□□ 1.11
C9orf3-209ENST00000460573 SLC5A10A0PJK1 596 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 RHPN2P1A8MT19 583 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 IQCF5A8MTL0 148 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 E5RI56 91 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 RFPL3O75679 317 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 DKK1O94907 266 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 BRAFP15056 766 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 CHRM3P20309 590 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 CCR7P32248 378 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 MAZP56270 477 aaKnown RBP21.98■■□□□ 1.11
C9orf3-209ENST00000460573 E2F1Q01094 437 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 CLCA4Q14CN2 919 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 KYNUQ16719 465 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 GUSBP11Q6P575 273 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 CNSTQ6PJW8 725 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 XKR5Q6UX68 686 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 EFL1Q7Z2Z2 1120 aaKnown RBP21.98■■□□□ 1.11
C9orf3-209ENST00000460573 SFTPA2Q8IWL1 248 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 IFI44Q8TCB0 444 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 KCNJ9Q92806 393 aa21.98■■□□□ 1.11
C9orf3-209ENST00000460573 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms