RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SERPINA9Q86WD7 417 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 SLAIN1Q8ND83 568 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 UBXN10Q96LJ8 280 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 TDRD1Q9BXT4 1180 aaKnown RBP15.2■□□□□ 0.02
LMNB1-203ENST00000460265 RIC8BQ9NVN3 520 aa15.2■□□□□ 0.02
LMNB1-203ENST00000460265 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.2■□□□□ 0.02
LMNB1-203ENST00000460265 MROH6A6NGR9 719 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 TARM1B6A8C7 271 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 CAPN1P07384 714 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 PCNAP12004 261 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 DPP6P42658 865 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 HK2P52789 917 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 DNAJB13P59910 316 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 TUBA4AP68366 448 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 LDLRAP1Q5SW96 308 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 UGT3A1Q6NUS8 523 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 CHERPQ8IWX8 916 aaKnown RBP15.19■□□□□ 0.02
LMNB1-203ENST00000460265 CMTM8Q8IZV2 173 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 APCDD1Q8J025 514 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 LRCH3Q96II8 777 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 TBCDQ9BTW9 1192 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 FNIP2Q9P278 1114 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 ERGIC3Q9Y282 383 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 PRORSD1PA6NEY8 169 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 MTX2O75431 263 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 EPOP01588 193 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 TPTEP56180 551 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 CANT1Q8WVQ1 401 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 MYO19Q96H55 970 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 CORINQ9Y5Q5 1042 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 PRAMEF12O95522 483 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 MTHFD1P11586 935 aaKnown RBP15.19■□□□□ 0.02
LMNB1-203ENST00000460265 STK19P49842 368 aaPredicted RBP15.19■□□□□ 0.02
LMNB1-203ENST00000460265 ATP6V0D1P61421 351 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 PPP2R2DQ66LE6 453 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 FAM126BQ8IXS8 530 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 FIBCD1Q8N539 461 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 OR52B6Q8NGF0 335 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 FEM1AQ9BSK4 669 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 BOCQ9BWV1 1114 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 POLR1BQ9H9Y6 1135 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 OLAHQ9NV23 265 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 ITM2BQ9Y287 266 aa15.19■□□□□ 0.02
LMNB1-203ENST00000460265 INPPL1O15357 1258 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 MYO1DO94832 1006 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 UGT2B4P06133 528 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 OGNP20774 298 aaKnown RBP15.18■□□□□ 0.02
LMNB1-203ENST00000460265 FDXRP22570 491 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 EEF1B2P24534 225 aaKnown RBP15.18■□□□□ 0.02
LMNB1-203ENST00000460265 INPP5AQ14642 412 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 NEDD8Q15843 81 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 RABL3Q5HYI8 236 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 AFMIDQ63HM1 303 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 HJURPQ8NCD3 748 aaPredicted RBP15.18■□□□□ 0.02
LMNB1-203ENST00000460265 ZBTB18Q99592 522 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 C17orf80Q9BSJ5 609 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 RPF2Q9H7B2 306 aaKnown RBP15.18■□□□□ 0.02
LMNB1-203ENST00000460265 ACTR8Q9H981 624 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 ARIH1Q9Y4X5 557 aaPredicted RBP15.18■□□□□ 0.02
LMNB1-203ENST00000460265 IGLV3-10A0A075B6K4 115 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 A0A1B0GTL3 188 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 A6NL46 340 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 PSMD11O00231 422 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 CCL16O15467 120 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 RNASEH2AO75792 299 aaKnown RBP15.18■□□□□ 0.02
LMNB1-203ENST00000460265 BCL10O95999 233 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 PIGGQ5H8A4 983 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 UTS2BQ765I0 119 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 TMEM74Q96NL1 305 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 TSEN34Q9BSV6 310 aaKnown RBP15.18■□□□□ 0.02
LMNB1-203ENST00000460265 NSUN3Q9H649 340 aaKnown RBP15.18■□□□□ 0.02
LMNB1-203ENST00000460265 NLE1Q9NVX2 485 aaPredicted RBP15.18■□□□□ 0.02
LMNB1-203ENST00000460265 ST14Q9Y5Y6 855 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 H3BMQ9 156 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 SULT1C4O75897 302 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 HOXB8P17481 243 aaPredicted RBP15.18■□□□□ 0.02
LMNB1-203ENST00000460265 EIF4EBP2Q13542 120 aaPredicted RBP15.18■□□□□ 0.02
LMNB1-203ENST00000460265 PLA2G4EQ3MJ16 856 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 HM13Q8TCT9 377 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 DPF3Q92784 378 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 RNF145Q96MT1 663 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 COG8Q96MW5 612 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 KCTD14Q9BQ13 255 aaPredicted RBP15.18■□□□□ 0.02
LMNB1-203ENST00000460265 TFB2MQ9H5Q4 396 aaKnown RBP15.18■□□□□ 0.02
LMNB1-203ENST00000460265 IPPKQ9H8X2 491 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 ERVK-11Q9UQG0 969 aa15.18■□□□□ 0.02
LMNB1-203ENST00000460265 SEC22BO75396 215 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 HIST1H2AGP0C0S8 130 aaPredicted RBP15.17■□□□□ 0.02
LMNB1-203ENST00000460265 HIST1H2ADP20671 130 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 PSMA4P25789 261 aaKnown RBP15.17■□□□□ 0.02
LMNB1-203ENST00000460265 UFM1P61960 85 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 RPL38P63173 70 aaKnown RBP15.17■□□□□ 0.02
LMNB1-203ENST00000460265 CARTPTQ16568 116 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 TEX26Q8N6G2 289 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 ZNF366Q8N895 744 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 KIAA1191Q96A73 305 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 HIST1H2AHQ96KK5 128 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 KLHL32Q96NJ5 620 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 ZNF599Q96NL3 588 aa15.17■□□□□ 0.02
LMNB1-203ENST00000460265 HIST1H2AJQ99878 128 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms