RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 ZNF470Q6ECI4 717 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 CAPRIN2Q6IMN6 1127 aaKnown RBP10.48□□□□□ -0.73
UBR4-208ENST00000459947 IGF2-ASQ6U949 168 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 DET1Q7L5Y6 550 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 LPGAT1Q92604 370 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 TRIT1Q9H3H1 467 aaKnown RBP10.48□□□□□ -0.73
UBR4-208ENST00000459947 CCDC78A2IDD5 438 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 ZNF839A8K0R7 811 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 D6RAR5 112 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 E5RI56 91 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 CCL22O00626 93 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 VPS26AO75436 327 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 RPLP0P05388 317 aaKnown RBP10.48□□□□□ -0.73
UBR4-208ENST00000459947 ELK3P41970 407 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 INHBCP55103 352 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 CRADDP78560 199 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 INSM1Q01101 510 aaPredicted RBP10.48□□□□□ -0.73
UBR4-208ENST00000459947 RPE65Q16518 533 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 DNTTIP2Q5QJE6 756 aaKnown RBP10.48□□□□□ -0.73
UBR4-208ENST00000459947 WDR74Q6RFH5 385 aaPredicted RBP10.48□□□□□ -0.73
UBR4-208ENST00000459947 PIM3Q86V86 326 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 CFAP206Q8IYR0 622 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 WWP1Q9H0M0 922 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 EPHA6Q9UF33 1036 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 CABIN1Q9Y6J0 2220 aa10.48□□□□□ -0.73
UBR4-208ENST00000459947 TERF1P54274 439 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 DHRS13Q6UX07 377 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 CCNI2Q6ZMN8 369 aaPredicted RBP10.47□□□□□ -0.73
UBR4-208ENST00000459947 TBC1D21Q8IYX1 336 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 C2CD4AQ8NCU7 369 aaPredicted RBP10.47□□□□□ -0.73
UBR4-208ENST00000459947 OR4D9Q8NGE8 314 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 WDR36Q8NI36 951 aaKnown RBP10.47□□□□□ -0.73
UBR4-208ENST00000459947 C12orf66Q96MD2 445 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 KIR3DX1Q9H7L2 352 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 PRDM8Q9NQV8 689 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 PRKAB1Q9Y478 270 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 PLEKHM1Q9Y4G2 1056 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 SLC5A10A0PJK1 596 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 OR51F1A6NGY5 319 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 SGTAO43765 313 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 AVILO75366 819 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 LEPRP48357 1165 aaKnown RBP10.47□□□□□ -0.73
UBR4-208ENST00000459947 RGS4P49798 205 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 EIF3BP55884 814 aaKnown RBP10.47□□□□□ -0.73
UBR4-208ENST00000459947 CCDC157Q569K6 752 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 PERM1Q5SV97 790 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 CCDC91Q7Z6B0 441 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 KCNJ9Q92806 393 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 CFAP36Q96G28 342 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 ZDHHC12Q96GR4 267 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 SAYSD1Q9NPB0 183 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 GRHL1Q9NZI5 618 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 TXNDC16Q9P2K2 825 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 DKK4Q9UBT3 224 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 SLC23A2Q9UGH3 650 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 CHMP2BQ9UQN3 213 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 PCNX2A6NKB5 2137 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 MAP3K7O43318 606 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 MPC1LP0DKB6 136 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 AMD1P17707 334 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 CSE1LP55060 971 aaKnown RBP10.47□□□□□ -0.73
UBR4-208ENST00000459947 NFE2L1Q14494 772 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 KCTD16Q68DU8 428 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 OOSP2Q86WS3 158 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 KMT5CQ86Y97 462 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 RELL1Q8IUW5 271 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 SLC22A15Q8IZD6 547 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 ACVR1CQ8NER5 493 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 ZNF778Q96MU6 729 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 OR52A5Q9H2C5 316 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 SYNDIG1Q9H7V2 258 aa10.47□□□□□ -0.73
UBR4-208ENST00000459947 IGHV1OR21-1A0A087WYE8 117 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 CSO75390 466 aaKnown RBP10.46□□□□□ -0.73
UBR4-208ENST00000459947 PROS1P07225 676 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 ARNTP27540 789 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 SHMT2P34897 504 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 HSD17B2P37059 387 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 PPM1FP49593 454 aaPredicted RBP10.46□□□□□ -0.73
UBR4-208ENST00000459947 PRKAA1Q13131 559 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 SLMAPQ14BN4 828 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 FAM45BPQ6NSW5 357 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 TMEM71Q6P5X7 295 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 OTOAQ7RTW8 1153 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 FBXO36Q8NEA4 188 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 FAM45AQ8TCE6 357 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 RMDN2Q96LZ7 410 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 L2HGDHQ9H9P8 463 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 ENTPD2Q9Y5L3 495 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 MCM3P25205 808 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 PLTPP55058 493 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 CCL7P80098 99 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 BOP1Q14137 746 aaKnown RBP10.46□□□□□ -0.73
UBR4-208ENST00000459947 UNC5AQ6ZN44 842 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 CHCHD4Q8N4Q1 142 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 INPP5DQ92835 1189 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 TSPAN17Q96FV3 270 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 TFB2MQ9H5Q4 396 aaKnown RBP10.46□□□□□ -0.73
UBR4-208ENST00000459947 SPATA7Q9P0W8 599 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 ZFATQ9P243 1243 aa10.46□□□□□ -0.73
UBR4-208ENST00000459947 MARCH4Q9P2E8 410 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms