RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 MTCL1Q9Y4B5 1905 aaKnown RBP16.41■□□□□ 0.22
CCDC43-202ENST00000457422 ZNF839A8K0R7 811 aa16.4■□□□□ 0.22
CCDC43-202ENST00000457422 GRM6O15303 877 aa16.4■□□□□ 0.22
CCDC43-202ENST00000457422 CBSLP0DN79 551 aa16.4■□□□□ 0.22
CCDC43-202ENST00000457422 IL12AP29459 219 aa16.4■□□□□ 0.22
CCDC43-202ENST00000457422 CBSP35520 551 aa16.4■□□□□ 0.22
CCDC43-202ENST00000457422 HSPA7P48741 367 aa16.4■□□□□ 0.22
CCDC43-202ENST00000457422 YBX1P67809 324 aaKnown RBP16.4■□□□□ 0.22
CCDC43-202ENST00000457422 PHKG1Q16816 387 aa16.4■□□□□ 0.22
CCDC43-202ENST00000457422 LRRC66Q68CR7 880 aa16.4■□□□□ 0.22
CCDC43-202ENST00000457422 HOMEZQ8IX15 550 aa16.4■□□□□ 0.22
CCDC43-202ENST00000457422 DPP10Q8N608 796 aa16.4■□□□□ 0.22
CCDC43-202ENST00000457422 CANT1Q8WVQ1 401 aa16.4■□□□□ 0.22
CCDC43-202ENST00000457422 RHBDF1Q96CC6 855 aa16.4■□□□□ 0.22
CCDC43-202ENST00000457422 TMEM79Q9BSE2 394 aa16.4■□□□□ 0.22
CCDC43-202ENST00000457422 CD244Q9BZW8 370 aa16.4■□□□□ 0.22
CCDC43-202ENST00000457422 HCFC1R1Q9NWW0 138 aa16.4■□□□□ 0.22
CCDC43-202ENST00000457422 ZDHHC3Q9NYG2 299 aa16.4■□□□□ 0.22
CCDC43-202ENST00000457422 UBAP1Q9NZ09 502 aa16.4■□□□□ 0.22
CCDC43-202ENST00000457422 EIF3FO00303 357 aaPredicted RBP16.39■□□□□ 0.21
CCDC43-202ENST00000457422 CDKL1Q00532 357 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 PRKG2Q13237 762 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 ASTLQ6HA08 431 aaPredicted RBP16.39■□□□□ 0.21
CCDC43-202ENST00000457422 HMBOX1Q6NT76 420 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 PRR23BQ6ZRT6 265 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 ERMP1Q7Z2K6 904 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 MILR1Q7Z6M3 343 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 ANKFN1Q8N957 763 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 KLHL23Q8NBE8 558 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 ZNF641Q96N77 438 aaPredicted RBP16.39■□□□□ 0.21
CCDC43-202ENST00000457422 SEMA6AQ9H2E6 1030 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 SNX13Q9Y5W8 968 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 MYOFQ9NZM1 2061 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 IGLV3-16A0A075B6K0 115 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 KATNA1O75449 491 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 BMP2P12643 396 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 HMOX2P30519 316 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 EEFSECP57772 596 aaKnown RBP16.39■□□□□ 0.21
CCDC43-202ENST00000457422 PTSQ03393 145 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 INPP5AQ14642 412 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 SMU1Q2TAY7 513 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 CDKL4Q5MAI5 379 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 ZDHHC20Q5W0Z9 365 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 GALNT4Q8N4A0 578 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 HBEGFQ99075 208 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 EGFL8Q99944 293 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 SLC2A11Q9BYW1 496 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 TRIM8Q9BZR9 551 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 ALG2Q9H553 416 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 ZDHHC6Q9H6R6 413 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 COQ10BQ9H8M1 238 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 KCTD5Q9NXV2 234 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 OPTCQ9UBM4 332 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 SLC25A13Q9UJS0 675 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 CCL27Q9Y4X3 112 aa16.39■□□□□ 0.21
CCDC43-202ENST00000457422 DOCK6Q96HP0 2047 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 A0A1W2PQ67 120 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 DHRS12A0PJE2 317 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 IFRD1O00458 451 aaPredicted RBP16.38■□□□□ 0.21
CCDC43-202ENST00000457422 KIAA0355O15063 1070 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 ANKRD28O15084 1053 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 ARPC2O15144 300 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 LHCGRP22888 699 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 GSK3BP49841 420 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 CCNHP51946 323 aaPredicted RBP16.38■□□□□ 0.21
CCDC43-202ENST00000457422 ABRAXAS2Q15018 415 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 NR6A1Q15406 480 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 FXNQ16595 210 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 TIGD2Q4W5G0 525 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 LIN52Q52LA3 116 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 CARD16Q5EG05 197 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 MTX3Q5HYI7 312 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 RFLNAQ6ZTI6 216 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 TMEM25Q86YD3 366 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 KIAA2013Q8IYS2 634 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 ADGRG2Q8IZP9 1017 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 AHI1Q8N157 1196 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 TCEAL4Q96EI5 215 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 ASIC4Q96FT7 647 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 PPP3R2Q96LZ3 170 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 COPS8Q99627 209 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 CENPKQ9BS16 269 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 NTMT1Q9BV86 223 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 ACTL8Q9H568 366 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 WWOXQ9NZC7 414 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 AK5Q9Y6K8 562 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 SLC4A7Q9Y6M7 1214 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 LAMA2P24043 3122 aaKnown RBP16.38■□□□□ 0.21
CCDC43-202ENST00000457422 K7EPI3 171 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 ARNTLO00327 626 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 HNRNPRO43390 633 aaKnown RBP16.38■□□□□ 0.21
CCDC43-202ENST00000457422 WDR47O94967 919 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 POP4O95707 220 aaKnown RBP16.38■□□□□ 0.21
CCDC43-202ENST00000457422 ENO2P09104 434 aaPredicted RBP16.38■□□□□ 0.21
CCDC43-202ENST00000457422 JAK1P23458 1154 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 DDX6P26196 483 aaKnown RBP eCLIP16.38■□□□□ 0.21
CCDC43-202ENST00000457422 EPHA5P54756 1037 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 HTRA4P83105 476 aaPredicted RBP16.38■□□□□ 0.21
CCDC43-202ENST00000457422 CREB5Q02930 508 aa16.38■□□□□ 0.21
CCDC43-202ENST00000457422 CYP20A1Q6UW02 462 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms