RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 FDXRP22570 491 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 CSKP41240 450 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 ESRRGP62508 458 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 INPP5AQ14642 412 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 SLC14A2Q15849 920 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 SYVN1Q86TM6 617 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 PIANPQ8IYJ0 282 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 SLC15A4Q8N697 577 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 OR10Q1Q8NGQ4 319 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 HM13Q8TCT9 377 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 SLC22A17Q8WUG5 538 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 CCDC97Q96F63 343 aaPredicted RBP12.24□□□□□ -0.45
LINC00959-201ENST00000456581 TSPAN17Q96FV3 270 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 CENPNQ96H22 339 aaPredicted RBP12.24□□□□□ -0.45
LINC00959-201ENST00000456581 ATOH8Q96SQ7 321 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 MRPL40Q9NQ50 206 aaKnown RBP12.24□□□□□ -0.45
LINC00959-201ENST00000456581 SDR39U1Q9NRG7 319 aaPredicted RBP12.24□□□□□ -0.45
LINC00959-201ENST00000456581 MRPL17Q9NRX2 175 aaKnown RBP12.24□□□□□ -0.45
LINC00959-201ENST00000456581 FAIMQ9NVQ4 179 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 SELENONQ9NZV5 590 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 MED16Q9Y2X0 877 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 TCRBV5S2A0A599 114 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 IQCF5A8MTL0 148 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 ADAM23O75077 832 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 IMPDH2P12268 514 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 CTPS1P17812 591 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 DGKQP52824 942 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 EPHB3P54753 998 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 TUBA4AP68366 448 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 BLOC1S3Q6QNY0 202 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 GLT6D1Q7Z4J2 308 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 PATL1Q86TB9 770 aaKnown RBP12.24□□□□□ -0.45
LINC00959-201ENST00000456581 OR52B6Q8NGF0 335 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 OR4L1Q8NH43 312 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 GABPB2Q8TAK5 448 aaPredicted RBP12.24□□□□□ -0.45
LINC00959-201ENST00000456581 OVCA2Q8WZ82 227 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 FEM1AQ9BSK4 669 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 TDRD1Q9BXT4 1180 aaKnown RBP12.24□□□□□ -0.45
LINC00959-201ENST00000456581 ACTR3BQ9P1U1 418 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 RNF112Q9ULX5 631 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 GPR45Q9Y5Y3 372 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 TRANK1O15050 2925 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 A0A1W2PRU2 124 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 A8MX80 341 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 TOR1BO14657 336 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 XYLBO75191 536 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 ECI2O75521 394 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 RPP40O75818 363 aaKnown RBP12.24□□□□□ -0.45
LINC00959-201ENST00000456581 RASAL1O95294 804 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 CKMP06732 381 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 LBPP18428 481 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 RPS9P46781 194 aaKnown RBP12.24□□□□□ -0.45
LINC00959-201ENST00000456581 CYP2A13Q16696 494 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 ALG1LQ6GMV1 187 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 ANKRD26P1Q6NSI1 321 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 DDX53Q86TM3 631 aaKnown RBP12.24□□□□□ -0.45
LINC00959-201ENST00000456581 BBS7Q8IWZ6 715 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 MINDY1Q8N5J2 469 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 CDYL2Q8N8U2 506 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 MFSD2AQ8NA29 543 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 TRPV3Q8NET8 790 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 BIRC7Q96CA5 298 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 TRMT2BQ96GJ1 504 aaKnown RBP12.24□□□□□ -0.45
LINC00959-201ENST00000456581 HERC2P3Q9BVR0 1158 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 EPS8L2Q9H6S3 715 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 CARS2Q9HA77 564 aaKnown RBP12.24□□□□□ -0.45
LINC00959-201ENST00000456581 FANCEQ9HB96 536 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 SARS2Q9NP81 518 aaKnown RBP12.24□□□□□ -0.45
LINC00959-201ENST00000456581 PRDM8Q9NQV8 689 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 HCFC1R1Q9NWW0 138 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 VPS51Q9UID3 782 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 FKBPLQ9UIM3 349 aa12.24□□□□□ -0.45
LINC00959-201ENST00000456581 ABHD14A-ACY1A0A1B0GW23 586 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 RSL1D1O76021 490 aaKnown RBP12.23□□□□□ -0.45
LINC00959-201ENST00000456581 FGF18O76093 207 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 ALPIP09923 528 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 RFC2P35250 354 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 PIK3CGP48736 1102 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 ZNF140P52738 457 aaPredicted RBP12.23□□□□□ -0.45
LINC00959-201ENST00000456581 INTS11Q5TA45 600 aaKnown RBP12.23□□□□□ -0.45
LINC00959-201ENST00000456581 LCN8Q6JVE9 175 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 PSAPL1Q6NUJ1 521 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 HACD2Q6Y1H2 254 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 DNAJC14Q6Y2X3 702 aaPredicted RBP12.23□□□□□ -0.45
LINC00959-201ENST00000456581 TCEAL8Q8IYN2 117 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 DHRSXQ8N5I4 330 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 STON2Q8WXE9 905 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 MYLIPQ8WY64 445 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 ZNF599Q96NL3 588 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 CHID1Q9BWS9 393 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 NANOGQ9H9S0 305 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 CATSPERZQ9NTU4 200 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 SMPD3Q9NY59 655 aaPredicted RBP12.23□□□□□ -0.45
LINC00959-201ENST00000456581 CXXC1Q9P0U4 656 aaPredicted RBP12.23□□□□□ -0.45
LINC00959-201ENST00000456581 PCDHB9Q9Y5E1 797 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 GMEB1Q9Y692 573 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 BTN3A1O00481 513 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 NOBOXO60393 691 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 RHOBTB1O94844 696 aa12.23□□□□□ -0.45
LINC00959-201ENST00000456581 PARNO95453 639 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms