RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 LEPRP48357 1165 aaKnown RBP17.46■□□□□ 0.39
MSH6-207ENST00000456246 LMAN1P49257 510 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 RPA4Q13156 261 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 ITIH4Q14624 930 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 C4orf22Q6V702 233 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 SERPINA9Q86WD7 417 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 OOSP2Q86WS3 158 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 KMT5CQ86Y97 462 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 CARFQ8N187 725 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 CCDC89Q8N998 374 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 TRIM58Q8NG06 486 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.46■□□□□ 0.39
MSH6-207ENST00000456246 SPRY4Q9C004 299 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 KIR3DX1Q9H7L2 352 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 SEMA5BQ9P283 1151 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 PAK5Q9P286 719 aa17.46■□□□□ 0.39
MSH6-207ENST00000456246 FOXM1Q08050 763 aa17.45■□□□□ 0.38
MSH6-207ENST00000456246 ABHD18Q0P651 414 aa17.45■□□□□ 0.38
MSH6-207ENST00000456246 SRSF6Q13247 344 aaKnown RBP17.45■□□□□ 0.38
MSH6-207ENST00000456246 SEMA5AQ13591 1074 aa17.45■□□□□ 0.38
MSH6-207ENST00000456246 GSE1Q14687 1217 aa17.45■□□□□ 0.38
MSH6-207ENST00000456246 CCNG2Q16589 344 aa17.45■□□□□ 0.38
MSH6-207ENST00000456246 CAPRIN2Q6IMN6 1127 aaKnown RBP17.45■□□□□ 0.38
MSH6-207ENST00000456246 DRICH1Q6PGQ1 229 aaPredicted RBP17.45■□□□□ 0.38
MSH6-207ENST00000456246 PPP1R21Q6ZMI0 780 aa17.45■□□□□ 0.38
MSH6-207ENST00000456246 TAS2R42Q7RTR8 314 aa17.45■□□□□ 0.38
MSH6-207ENST00000456246 LRRC8AQ8IWT6 810 aa17.45■□□□□ 0.38
MSH6-207ENST00000456246 CFAP206Q8IYR0 622 aa17.45■□□□□ 0.38
MSH6-207ENST00000456246 ESX1Q8N693 406 aa17.45■□□□□ 0.38
MSH6-207ENST00000456246 JPH3Q8WXH2 748 aaPredicted RBP17.45■□□□□ 0.38
MSH6-207ENST00000456246 PEX13Q92968 403 aa17.45■□□□□ 0.38
MSH6-207ENST00000456246 MED8Q96G25 268 aa17.45■□□□□ 0.38
MSH6-207ENST00000456246 INSM2Q96T92 566 aaPredicted RBP17.45■□□□□ 0.38
MSH6-207ENST00000456246 CTRCQ99895 268 aa17.45■□□□□ 0.38
MSH6-207ENST00000456246 ETNK1Q9HBU6 452 aa17.45■□□□□ 0.38
MSH6-207ENST00000456246 LZTFL1Q9NQ48 299 aa17.45■□□□□ 0.38
MSH6-207ENST00000456246 RIMKLBQ9ULI2 386 aa17.45■□□□□ 0.38
MSH6-207ENST00000456246 OR5K3A6NET4 321 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 TLCD2A6NGC4 264 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 F8W8V4 182 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 MATN2O00339 956 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 IFRD1O00458 451 aaPredicted RBP17.44■□□□□ 0.38
MSH6-207ENST00000456246 CCL22O00626 93 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 C1QL1O75973 258 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 PRB1P04280 392 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 SFTPCP11686 197 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 NELFEP18615 380 aaKnown RBP17.44■□□□□ 0.38
MSH6-207ENST00000456246 MSNP26038 577 aaKnown RBP17.44■□□□□ 0.38
MSH6-207ENST00000456246 NSG1P42857 185 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 CD151P48509 253 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 SEPHS1P49903 392 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 KRT33BQ14525 404 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 DNTTIP2Q5QJE6 756 aaKnown RBP17.44■□□□□ 0.38
MSH6-207ENST00000456246 LYPLAL1Q5VWZ2 237 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 ARMC6Q6NXE6 501 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 FAM92BQ6ZTR7 304 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 NLRP9Q7RTR0 991 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 BPHLQ86WA6 291 aaPredicted RBP17.44■□□□□ 0.38
MSH6-207ENST00000456246 ZNF843Q8N446 348 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 OR52K1Q8NGK4 314 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 C1orf54Q8WWF1 131 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 RMDN2Q96LZ7 410 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 OR6C1Q96RD1 312 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 RANBP9Q96S59 729 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 TTC1Q99614 292 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 ARHGAP9Q9BRR9 750 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 ULBP3Q9BZM4 244 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 FAM96AQ9H5X1 160 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 COG4Q9H9E3 785 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 GPN2Q9H9Y4 310 aaPredicted RBP17.44■□□□□ 0.38
MSH6-207ENST00000456246 APMAPQ9HDC9 416 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 RAB6BQ9NRW1 208 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 FAM8A1Q9UBU6 413 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 SLC24A2Q9UI40 661 aa17.44■□□□□ 0.38
MSH6-207ENST00000456246 CFAP20Q9Y6A4 193 aaKnown RBP17.44■□□□□ 0.38
MSH6-207ENST00000456246 ZNF891A8MT65 544 aaPredicted RBP17.43■□□□□ 0.38
MSH6-207ENST00000456246 AP3B1O00203 1094 aa17.43■□□□□ 0.38
MSH6-207ENST00000456246 DLGAP3O95886 979 aa17.43■□□□□ 0.38
MSH6-207ENST00000456246 POLBP06746 335 aa17.43■□□□□ 0.38
MSH6-207ENST00000456246 LIFP15018 202 aa17.43■□□□□ 0.38
MSH6-207ENST00000456246 ADRA1DP25100 572 aa17.43■□□□□ 0.38
MSH6-207ENST00000456246 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.43■□□□□ 0.38
MSH6-207ENST00000456246 AFTPHQ6ULP2 937 aa17.43■□□□□ 0.38
MSH6-207ENST00000456246 PACS1Q6VY07 963 aa17.43■□□□□ 0.38
MSH6-207ENST00000456246 TAB3Q8N5C8 712 aaPredicted RBP17.43■□□□□ 0.38
MSH6-207ENST00000456246 SIDT2Q8NBJ9 832 aaKnown RBP17.43■□□□□ 0.38
MSH6-207ENST00000456246 ACVR1CQ8NER5 493 aa17.43■□□□□ 0.38
MSH6-207ENST00000456246 SLC45A3Q96JT2 553 aa17.43■□□□□ 0.38
MSH6-207ENST00000456246 SLC41A2Q96JW4 573 aa17.43■□□□□ 0.38
MSH6-207ENST00000456246 CATSPER2Q96P56 530 aa17.43■□□□□ 0.38
MSH6-207ENST00000456246 FCRL4Q96PJ5 515 aa17.43■□□□□ 0.38
MSH6-207ENST00000456246 PDE7BQ9NP56 450 aa17.43■□□□□ 0.38
MSH6-207ENST00000456246 EIF2B3Q9NR50 452 aaKnown RBP17.43■□□□□ 0.38
MSH6-207ENST00000456246 HOMER3Q9NSC5 361 aa17.43■□□□□ 0.38
MSH6-207ENST00000456246 PIH1D1Q9NWS0 290 aaKnown RBP17.43■□□□□ 0.38
MSH6-207ENST00000456246 HRASLS2Q9NWW9 162 aa17.43■□□□□ 0.38
MSH6-207ENST00000456246 CFAP46Q8IYW2 2715 aa17.43■□□□□ 0.38
MSH6-207ENST00000456246 PIEZO2Q9H5I5 2752 aa17.43■□□□□ 0.38
MSH6-207ENST00000456246 UBA6A0AVT1 1052 aaPredicted RBP17.42■□□□□ 0.38
MSH6-207ENST00000456246 GOLGA6L3A6NEY3 463 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms