RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 ADAM20O43506 726 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 HNRNPCL1O60812 293 aaKnown RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 TBX10O75333 385 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 SLC43A1O75387 559 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 RFPL2O75678 378 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 ALDH1A2O94788 518 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 HEXIM1O94992 359 aaKnown RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 RASAL1O95294 804 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 OAS1P00973 400 aaKnown RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 APOC2P02655 101 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 ZGLP1P0C6A0 271 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 PIM1P11309 404 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 FOSL1P15407 271 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 EPCAMP16422 314 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 ZFXP17010 805 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 PTPN2P17706 415 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 ERCC2P18074 760 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 TGM2P21980 687 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 GABRR2P28476 465 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 HTR7P34969 479 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 BSGP35613 385 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 GLRBP48167 497 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 NR2C2P49116 596 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 RGS19P49795 217 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 KCNQ1P51787 676 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 ZNF41P51814 821 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 PPP5CP53041 499 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 VCPP55072 806 aaKnown RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 TPD52P55327 224 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 WNT3P56703 355 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 EIF3EP60228 445 aaKnown RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 COG7P83436 770 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 DR1Q01658 176 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 OTUD4Q01804 1114 aaKnown RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 SATB1Q01826 763 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 GBE1Q04446 702 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 SF3A3Q12874 501 aaKnown RBP eCLIP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 SLC10A2Q12908 348 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 BYSLQ13895 437 aaKnown RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 DPYSQ14117 519 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 DHX34Q14147 1143 aaKnown RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 CRYMQ14894 314 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 TRADDQ15628 312 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 OASLQ15646 514 aaKnown RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 ADIPOQQ15848 244 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 PRICKLE4Q2TBC4 344 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 KRTCAP3Q53RY4 240 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 PPM1LQ5SGD2 360 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 PLEKHS1Q5SXH7 462 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 MANEALQ5VSG8 457 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 DUPD1Q68J44 220 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 TXNDC8Q6A555 127 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 WDR93Q6P2C0 686 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 CCDC137Q6PK04 289 aaKnown RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 TMC5Q6UXY8 1006 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 LIPIQ6XZB0 460 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 CCNI2Q6ZMN8 369 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 FAM83HQ6ZRV2 1179 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 CXXC5Q7LFL8 322 aaKnown RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 RBM23Q86U06 439 aaKnown RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 PROSER1Q86XN7 944 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 PDSS2Q86YH6 399 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 TMC8Q8IU68 726 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 IFT20Q8IY31 132 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 TDHQ8IZJ6 230 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 ELMOD1Q8N336 334 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 ATP6V0D2Q8N8Y2 350 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 FAM71DQ8N9W8 422 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 FAM46DQ8NEK8 389 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 MOSPD2Q8NHP6 518 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 P3H4Q92791 437 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 SLCO2A1Q92959 643 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 AZIN2Q96A70 460 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 VPS33AQ96AX1 596 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 HAUS1Q96CS2 278 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 BTN2A3PQ96KV6 586 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 RUNDC3BQ96NL0 473 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 MOGAT1Q96PD6 335 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 CYP2S1Q96SQ9 504 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 CITED2Q99967 270 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 ERP44Q9BS26 406 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 TACO1Q9BSH4 297 aaKnown RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 SPATA5L1Q9BVQ7 753 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 KRTAP9-2Q9BYQ4 174 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 PRO3102Q9H379 93 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 TLE6Q9H808 572 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 BARX1Q9HBU1 254 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 GPR35Q9HC97 309 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 EPB41L5Q9HCM4 733 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 GDF3Q9NR23 364 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 ARHGEF3Q9NR81 526 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 GKN1Q9NS71 199 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 CPSF2Q9P2I0 782 aaKnown RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 SLC12A6Q9UHW9 1150 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 XPO7Q9UIA9 1087 aaKnown RBP5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 MOSPD1Q9UJG1 213 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 DNPEPQ9ULA0 475 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 ZNF148Q9UQR1 794 aa5.19□□□□□ -1.58
HMGB1P4-201ENST00000455362 NEU2Q9Y3R4 380 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms