RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 CUEDC1Q9NWM3 386 aaPredicted RBP6.87□□□□□ -1.31
CHEK2-220ENST00000454252 AMFRQ9UKV5 643 aa6.87□□□□□ -1.31
CHEK2-220ENST00000454252 NTNG1Q9Y2I2 539 aa6.87□□□□□ -1.31
CHEK2-220ENST00000454252 ZNF711Q9Y462 761 aa6.87□□□□□ -1.31
CHEK2-220ENST00000454252 PCDHGA9Q9Y5G4 932 aaKnown RBP6.87□□□□□ -1.31
CHEK2-220ENST00000454252 PCDHA3Q9Y5H8 950 aa6.87□□□□□ -1.31
CHEK2-220ENST00000454252 ARHGAP10A1A4S6 786 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 OR5K3A6NET4 321 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 C3orf70A6NLC5 250 aaPredicted RBP6.86□□□□□ -1.31
CHEK2-220ENST00000454252 OR2AG2A6NM03 316 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 KMOO15229 486 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 BUD23O43709 281 aaKnown RBP6.86□□□□□ -1.31
CHEK2-220ENST00000454252 SPOPO43791 374 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 UGT1A9O60656 530 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 CPNE3O75131 537 aaKnown RBP6.86□□□□□ -1.31
CHEK2-220ENST00000454252 TMEM63AO94886 807 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 CDK14O94921 469 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 CBX6O95503 412 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 MT-ND3P03897 115 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 CAPN1P07384 714 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 UGT1A6P19224 532 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 UGT1A1P22309 533 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 UGT1A4P22310 534 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 CTNNA1P35221 906 aaKnown RBP6.86□□□□□ -1.31
CHEK2-220ENST00000454252 KPNA2P52292 529 aaKnown RBP6.86□□□□□ -1.31
CHEK2-220ENST00000454252 ZNF135P52742 658 aaPredicted RBP6.86□□□□□ -1.31
CHEK2-220ENST00000454252 RPS15P62841 145 aaKnown RBP6.86□□□□□ -1.31
CHEK2-220ENST00000454252 NFE2L1Q14494 772 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 PTPRCAPQ14761 206 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 PAFAH1B3Q15102 231 aaKnown RBP6.86□□□□□ -1.31
CHEK2-220ENST00000454252 PLCL1Q15111 1095 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 LLGL1Q15334 1064 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 IFI16Q16666 785 aaKnown RBP6.86□□□□□ -1.31
CHEK2-220ENST00000454252 KYNUQ16719 465 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 DNTTIP2Q5QJE6 756 aaKnown RBP6.86□□□□□ -1.31
CHEK2-220ENST00000454252 PLEKHS1Q5SXH7 462 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 ABRAXAS1Q6UWZ7 409 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 PEX26Q7Z412 305 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 TICAM1Q8IUC6 712 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 TRAM1L1Q8N609 369 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 LILRA3Q8N6C8 439 aaPredicted RBP6.86□□□□□ -1.31
CHEK2-220ENST00000454252 RASGEF1AQ8N9B8 481 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 CCNYQ8ND76 341 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 SPATA22Q8NHS9 363 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 FAM71BQ8TC56 605 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 CCHCR1Q8TD31 782 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 COG1Q8WTW3 980 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 TEKT4Q8WW24 435 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 THAP4Q8WY91 577 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 ZNF501Q96CX3 271 aaPredicted RBP6.86□□□□□ -1.31
CHEK2-220ENST00000454252 CALR3Q96L12 384 aaKnown RBP6.86□□□□□ -1.31
CHEK2-220ENST00000454252 TIMM29Q9BSF4 260 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 GPR87Q9BY21 358 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 UGT1A7Q9HAW7 530 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 UGT1A10Q9HAW8 530 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 UGT1A8Q9HAW9 530 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 WASH6PQ9NQA3 447 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 RRAGDQ9NQL2 400 aaPredicted RBP6.86□□□□□ -1.31
CHEK2-220ENST00000454252 UBP1Q9NZI7 540 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 EPHA6Q9UF33 1036 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 SNX7Q9UNH6 387 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 FARSAQ9Y285 508 aaKnown RBP6.86□□□□□ -1.31
CHEK2-220ENST00000454252 JRKLQ9Y4A0 524 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 CSAG2Q9Y5P2 127 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 ADGRG4Q8IZF6 3080 aa6.86□□□□□ -1.31
CHEK2-220ENST00000454252 RP1L1Q8IWN7 2480 aaPredicted RBP6.86□□□□□ -1.31
CHEK2-220ENST00000454252 ZFHX3Q15911 3703 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 UBA6A0AVT1 1052 aaPredicted RBP6.85□□□□□ -1.31
CHEK2-220ENST00000454252 RGSL1A5PLK6 1076 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 OR6C74A6NCV1 312 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 ANKUB1A6NFN9 424 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 MEN1O00255 615 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 DPM1O60762 260 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 ALOX12BO75342 701 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 POP7O75817 140 aaKnown RBP6.85□□□□□ -1.31
CHEK2-220ENST00000454252 KRT38O76015 456 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 DDAH2O95865 285 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 RECKO95980 971 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 MT-CYBP00156 380 aaPredicted RBP6.85□□□□□ -1.31
CHEK2-220ENST00000454252 CTSBP07858 339 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 PYGMP11217 842 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 LPOP22079 712 aaPredicted RBP6.85□□□□□ -1.31
CHEK2-220ENST00000454252 IDSP22304 550 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 CCNCP24863 283 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 OTX2P32243 289 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 CXCR5P32302 372 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 RORAP35398 523 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 ARL4DP49703 201 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 DCDC1P59894 354 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 RPL26P61254 145 aaKnown RBP6.85□□□□□ -1.31
CHEK2-220ENST00000454252 TUBB4BP68371 445 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 HSD11B2P80365 405 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 ADCY2Q08462 1091 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 TMEM115Q12893 351 aaPredicted RBP6.85□□□□□ -1.31
CHEK2-220ENST00000454252 TUBB2AQ13885 445 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 RPS6KA1Q15418 735 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 TAZQ16635 292 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 ZNF789Q5FWF6 425 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 ZFYVE27Q5T4F4 411 aa6.85□□□□□ -1.31
CHEK2-220ENST00000454252 LRRC38Q5VT99 294 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms