RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 NKD1Q969G9 470 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 CDKN2AIPNLQ96HQ2 116 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 ZNF514Q96K75 400 aaPredicted RBP9.46□□□□□ -0.9
USP54-207ENST00000451492 NRTNQ99748 197 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 ASPSCR1Q9BZE9 553 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 ULBP3Q9BZM4 244 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 SEMA4CQ9C0C4 833 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 ZNF768Q9H5H4 540 aaKnown RBP9.46□□□□□ -0.9
USP54-207ENST00000451492 COG4Q9H9E3 785 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 WASH6PQ9NQA3 447 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 SIDT1Q9NXL6 827 aaKnown RBP9.46□□□□□ -0.9
USP54-207ENST00000451492 ZDHHC3Q9NYG2 299 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 PDP2Q9P2J9 529 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 SLC2A6Q9UGQ3 507 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 PPP2R2CQ9Y2T4 447 aa9.46□□□□□ -0.9
USP54-207ENST00000451492 IGHV5-51A0A0C4DH38 117 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 LOC101059948A0A1B0GTJ6 334 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 CCDC162PA2VCL2 907 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 GSAPA4D1B5 854 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 OR6C74A6NCV1 312 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 KCNJ13O60928 360 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 PRKAR1AP10644 381 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 ZNF28P17035 718 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 ITGB6P18564 788 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 POLR2CP19387 275 aaPredicted RBP9.45□□□□□ -0.9
USP54-207ENST00000451492 STIP1P31948 543 aaKnown RBP9.45□□□□□ -0.9
USP54-207ENST00000451492 RPL22P35268 128 aaKnown RBP9.45□□□□□ -0.9
USP54-207ENST00000451492 ARL4DP49703 201 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 VPS41P49754 854 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 SESN2P58004 480 aaPredicted RBP9.45□□□□□ -0.9
USP54-207ENST00000451492 CRADDP78560 199 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 CACNG1Q06432 222 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 BOP1Q14137 746 aaKnown RBP9.45□□□□□ -0.9
USP54-207ENST00000451492 SIX1Q15475 284 aaPredicted RBP9.45□□□□□ -0.9
USP54-207ENST00000451492 TRIP13Q15645 432 aaPredicted RBP9.45□□□□□ -0.9
USP54-207ENST00000451492 GPR33Q49SQ1 333 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 SYTL3Q4VX76 610 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 DNTTIP2Q5QJE6 756 aaKnown RBP9.45□□□□□ -0.9
USP54-207ENST00000451492 ARMC6Q6NXE6 501 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 FBXO38Q6PIJ6 1188 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 CERS6Q6ZMG9 384 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 OOSP2Q86WS3 158 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 NLGN4XQ8N0W4 816 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 SIDT2Q8NBJ9 832 aaKnown RBP9.45□□□□□ -0.9
USP54-207ENST00000451492 PPHLN1Q8NEY8 458 aaKnown RBP9.45□□□□□ -0.9
USP54-207ENST00000451492 NLGN4YQ8NFZ3 816 aaPredicted RBP9.45□□□□□ -0.9
USP54-207ENST00000451492 TRIM58Q8NG06 486 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 OR13J1Q8NGT2 312 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 OR6P1Q8NGX9 317 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 ZDHHC12Q96GR4 267 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 ZNF778Q96MU6 729 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 TEFMQ96QE5 360 aaKnown RBP9.45□□□□□ -0.9
USP54-207ENST00000451492 FERD3LQ96RJ6 166 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 MAP3K3Q99759 626 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 CCM2Q9BSQ5 444 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 HGH1Q9BTY7 390 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 TLR10Q9BXR5 811 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 FRMD8P1Q9BZ68 369 aaPredicted RBP9.45□□□□□ -0.9
USP54-207ENST00000451492 VPS37BQ9H9H4 285 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 HRASLS2Q9NWW9 162 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 SOHLH2Q9NX45 425 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 PAK5Q9P286 719 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 LNPEPQ9UIQ6 1025 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 ACSL5Q9ULC5 683 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 TTC7AQ9ULT0 858 aaPredicted RBP9.45□□□□□ -0.9
USP54-207ENST00000451492 SSUH2Q9Y2M2 353 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 PCDHGA3Q9Y5H0 932 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 MRPS18BQ9Y676 258 aaKnown RBP9.45□□□□□ -0.9
USP54-207ENST00000451492 DNMT3AQ9Y6K1 912 aaPredicted RBP9.45□□□□□ -0.9
USP54-207ENST00000451492 PRSS21Q9Y6M0 314 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 BSNQ9UPA5 3926 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 BOD1L1Q8NFC6 3051 aa9.45□□□□□ -0.9
USP54-207ENST00000451492 SNRNP200O75643 2136 aaKnown RBP9.44□□□□□ -0.9
USP54-207ENST00000451492 TRBV5-4A0A0C4DH59 114 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 UBA6A0AVT1 1052 aaPredicted RBP9.44□□□□□ -0.9
USP54-207ENST00000451492 HEATR9A2RTY3 570 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 OR5K3A6NET4 321 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 AGAP14A8MT82 685 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.44□□□□□ -0.9
USP54-207ENST00000451492 H7C0S8 307 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 IFRD1O00458 451 aaPredicted RBP9.44□□□□□ -0.9
USP54-207ENST00000451492 OR1I1O60431 355 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 KIAA0754O94854 1291 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 GOT2P00505 430 aaKnown RBP9.44□□□□□ -0.9
USP54-207ENST00000451492 ANKRD34CP0C6C1 535 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 EBLN1P0CF75 366 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 ATXN8OSP0DMR3 200 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 PDHA2P29803 388 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 FOXN2P32314 431 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 PRAMEP78395 509 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 C19orf57Q0VDD7 668 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 PRKG2Q13237 762 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 TUBB3Q13509 450 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 SEMA5AQ13591 1074 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 SKIDA1Q1XH10 827 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 TSTD2Q5T7W7 516 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 KLHL35Q6PF15 583 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 AFTPHQ6ULP2 937 aa9.44□□□□□ -0.9
USP54-207ENST00000451492 TIPARPQ7Z3E1 657 aaKnown RBP9.44□□□□□ -0.9
USP54-207ENST00000451492 PRSS42Q7Z5A4 293 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms