RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 FAM46DQ8NEK8 389 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 HM13Q8TCT9 377 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 EPS8L3Q8TE67 593 aaKnown RBP12.79□□□□□ -0.36
VPS33A-202ENST00000451053 SETD7Q8WTS6 366 aaKnown RBP12.79□□□□□ -0.36
VPS33A-202ENST00000451053 PGM2Q96G03 612 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 CAMK1GQ96NX5 476 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 SH3GL2Q99962 352 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 DHRS4Q9BTZ2 278 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 PRDM8Q9NQV8 689 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 SIRPGQ9P1W8 387 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 TBC1D29Q9UFV1 150 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 LGALS13Q9UHV8 139 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 PCDHB1Q9Y5F3 818 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 A6NCN8 305 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 AGPSO00116 658 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 TPP1O14773 563 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 KCNJ13O60928 360 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 ALPPL2P10696 532 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 MYF5P13349 255 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 RPL10P27635 214 aaKnown RBP12.78□□□□□ -0.36
VPS33A-202ENST00000451053 CCR7P32248 378 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 SPRP35270 261 aaPredicted RBP12.78□□□□□ -0.36
VPS33A-202ENST00000451053 SLCO1A2P46721 670 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 PREPP48147 710 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 CD151P48509 253 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 BOP1Q14137 746 aaKnown RBP12.78□□□□□ -0.36
VPS33A-202ENST00000451053 SEPT7Q16181 437 aaKnown RBP12.78□□□□□ -0.36
VPS33A-202ENST00000451053 INAVAQ3KP66 663 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 RBM20Q5T481 1227 aaKnown RBP12.78□□□□□ -0.36
VPS33A-202ENST00000451053 GRTP1Q5TC63 336 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 MTERF4Q7Z6M4 381 aaKnown RBP12.78□□□□□ -0.36
VPS33A-202ENST00000451053 STRA8Q7Z7C7 330 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 PIP4P1Q86T03 277 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 SPNS2Q8IVW8 549 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 CFAP206Q8IYR0 622 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 KYQ8NBH2 561 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 BAHD1Q8TBE0 780 aaPredicted RBP12.78□□□□□ -0.36
VPS33A-202ENST00000451053 RHBDD1Q8TEB9 315 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 ZDHHC1Q8WTX9 485 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 DCAKDQ8WVC6 231 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 PATE1Q8WXA2 126 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 ELMO1Q92556 727 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 FAM136AQ96C01 138 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 MTBPQ96DY7 904 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 ATXN7L3BQ96GX2 97 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 NDNQ99608 321 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 MCMBPQ9BTE3 642 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 AARSD1Q9BTE6 412 aaKnown RBP12.78□□□□□ -0.36
VPS33A-202ENST00000451053 CENPHQ9H3R5 247 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 DPEP2Q9H4A9 486 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 COG4Q9H9E3 785 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 SCHIP1Q9P0W5 487 aaPredicted RBP12.78□□□□□ -0.36
VPS33A-202ENST00000451053 GALPQ9UBC7 116 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 PCOLCE2Q9UKZ9 415 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 MED16Q9Y2X0 877 aa12.78□□□□□ -0.36
VPS33A-202ENST00000451053 ZFC3H1O60293 1989 aaKnown RBP12.78□□□□□ -0.36
VPS33A-202ENST00000451053 TRBV23OR9-2A0A075B6M9 112 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 LY6G6EA0A0G2JKS1 128 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 C17orf113A0A1B0GUU1 675 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 PDZK1P1A8MUH7 402 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 F8W8V4 182 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 H3BMM5 538 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 SLC30A4O14863 429 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 NOBOXO60393 691 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 CBFA2T3O75081 653 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 FAM155BO75949 473 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 GSTM1P09488 218 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 BRAFP15056 766 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 IDSP22304 550 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 AOAHP28039 575 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 GCAP28676 217 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 GSTM4Q03013 218 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 TMED2Q15363 201 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 AGBL2Q5U5Z8 902 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 METRNLQ641Q3 311 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 ZCCHC8Q6NZY4 707 aaKnown RBP12.77□□□□□ -0.37
VPS33A-202ENST00000451053 OGFOD3Q6PK18 319 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 ZC3HC1Q86WB0 502 aaKnown RBP12.77□□□□□ -0.37
VPS33A-202ENST00000451053 SLC35F3Q8IY50 421 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 NAGSQ8N159 534 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 ACVR1CQ8NER5 493 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 MRRFQ96E11 262 aaKnown RBP12.77□□□□□ -0.37
VPS33A-202ENST00000451053 APOLD1Q96LR9 279 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 PANX3Q96QZ0 392 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 RBBP8Q99708 897 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 DUSP23Q9BVJ7 150 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 TSSK1BQ9BXA7 367 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 CCDC68Q9H2F9 335 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 TMBIM4Q9HC24 238 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 SARS2Q9NP81 518 aaKnown RBP12.77□□□□□ -0.37
VPS33A-202ENST00000451053 CORO1CQ9ULV4 474 aaPredicted RBP12.77□□□□□ -0.37
VPS33A-202ENST00000451053 PSMD13Q9UNM6 376 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 WDR37Q9Y2I8 494 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 U3KQA8 63 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 PIKFYVEQ9Y2I7 2098 aa12.77□□□□□ -0.37
VPS33A-202ENST00000451053 ASCC3Q8N3C0 2202 aaKnown RBP12.76□□□□□ -0.37
VPS33A-202ENST00000451053 CABIN1Q9Y6J0 2220 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 FAM186AA6NE01 2351 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 SLC5A10A0PJK1 596 aa12.76□□□□□ -0.37
VPS33A-202ENST00000451053 KLHL33A6NCF5 533 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms