RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 TARSP26639 723 aaKnown RBP13.99□□□□□ -0.17
USP39-207ENST00000450066 EPHA3P29320 983 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 PDCD2Q16342 344 aaPredicted RBP13.99□□□□□ -0.17
USP39-207ENST00000450066 FBXO48Q5FWF7 155 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 SULT1C3Q6IMI6 304 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 PNCKQ6P2M8 343 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 ACAD11Q709F0 780 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 VRK3Q8IV63 474 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 GANCQ8TET4 914 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 HIC2Q96JB3 615 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 MAELQ96JY0 434 aaKnown RBP13.99□□□□□ -0.17
USP39-207ENST00000450066 ZNF514Q96K75 400 aaPredicted RBP13.99□□□□□ -0.17
USP39-207ENST00000450066 OR52B2Q96RD2 323 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 CCDC28BQ9BUN5 200 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 CCDC106Q9BWC9 280 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 SLC12A9Q9BXP2 914 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 OR2AG1Q9H205 316 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 WDR55Q9H6Y2 383 aaPredicted RBP13.99□□□□□ -0.17
USP39-207ENST00000450066 MID1IP1Q9NPA3 183 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 SLC2A4RGQ9NR83 387 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 SHISA7A6NL88 538 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 GFYI3L273 518 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 SLC16A5O15375 505 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 PLRG1O43660 514 aaKnown RBP13.99□□□□□ -0.17
USP39-207ENST00000450066 VEGFDO43915 354 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 HNRNPCL1O60812 293 aaKnown RBP13.99□□□□□ -0.17
USP39-207ENST00000450066 CBX6O95503 412 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 SRFP11831 508 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 RPS21P63220 83 aaKnown RBP13.99□□□□□ -0.17
USP39-207ENST00000450066 SP140Q13342 867 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 CCINQ13939 588 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 METTL2BQ6P1Q9 378 aaKnown RBP13.99□□□□□ -0.17
USP39-207ENST00000450066 TRIM74Q86UV6 250 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 PLA2G15Q8NCC3 412 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 AGAP11Q8TF27 550 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 SKA2Q8WVK7 121 aaPredicted RBP13.99□□□□□ -0.17
USP39-207ENST00000450066 FAM3CQ92520 227 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 COX14Q96I36 57 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 CDX2Q99626 313 aaPredicted RBP13.99□□□□□ -0.17
USP39-207ENST00000450066 MEAF6Q9HAF1 191 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 PARVBQ9HBI1 364 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 ZBTB26Q9HCK0 441 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 SEMA4BQ9NPR2 832 aaPredicted RBP13.99□□□□□ -0.17
USP39-207ENST00000450066 EIF2B4Q9UI10 523 aaKnown RBP13.99□□□□□ -0.17
USP39-207ENST00000450066 TRIM33Q9UPN9 1127 aa13.99□□□□□ -0.17
USP39-207ENST00000450066 ATG2BQ96BY7 2078 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 GOLGA8QA0A0J9YX86 632 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 GOLGA8OA6NCC3 632 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 TMEM202A6NGA9 273 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 GOLGA8NF8WBI6 632 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 AZIN1O14977 448 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 LILRB5O75023 590 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 GUCA1CO95843 209 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 RASSF2P50749 326 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 INHBCP55103 352 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 CDKL1Q00532 357 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 BTKQ06187 659 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 WSCD2Q2TBF2 565 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 LSM12Q3MHD2 195 aaKnown RBP13.98□□□□□ -0.17
USP39-207ENST00000450066 UGT3A2Q3SY77 523 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 TTC31Q49AM3 519 aaPredicted RBP13.98□□□□□ -0.17
USP39-207ENST00000450066 SYTL3Q4VX76 610 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 UBE2R2Q712K3 238 aaPredicted RBP13.98□□□□□ -0.17
USP39-207ENST00000450066 ASRGL1Q7L266 308 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 OR56A4Q8NGH8 313 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 RPLP0P6Q8NHW5 317 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 GLMNQ92990 594 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 TMEM159Q96B96 161 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 RHBDF1Q96CC6 855 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 PTCD3Q96EY7 689 aaKnown RBP13.98□□□□□ -0.17
USP39-207ENST00000450066 NSL1Q96IY1 281 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 PPP1R36Q96LQ0 422 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 EGFL8Q99944 293 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 HGH1Q9BTY7 390 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 TRIM54Q9BYV2 358 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 ARL8BQ9NVJ2 186 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 ATXN10Q9UBB4 475 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 FZD4Q9ULV1 537 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 GPR34Q9UPC5 381 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 ASB1Q9Y576 335 aa13.98□□□□□ -0.17
USP39-207ENST00000450066 SLC5A10A0PJK1 596 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 E9PBE3 544 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 SDHDO14521 159 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 TAPBPO15533 448 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 KLHL41O60662 606 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 MATN4O95460 622 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 ESRRBO95718 433 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 GSTM1P09488 218 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 AOC1P19801 751 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 NCF2P19878 526 aaPredicted RBP13.97□□□□□ -0.17
USP39-207ENST00000450066 TEAD1P28347 426 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 RPIAP49247 311 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 GSTM4Q03013 218 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 MLLT1Q03111 559 aaPredicted RBP13.97□□□□□ -0.17
USP39-207ENST00000450066 TDGQ13569 410 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 GTF2H3Q13889 308 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 UBAP2LQ14157 1087 aaKnown RBP13.97□□□□□ -0.17
USP39-207ENST00000450066 ZNF658BQ4V348 819 aaPredicted RBP13.97□□□□□ -0.17
USP39-207ENST00000450066 SLC44A4Q53GD3 710 aa13.97□□□□□ -0.17
USP39-207ENST00000450066 EOGTQ5NDL2 527 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms