RNA–Protein interactions for RNA: ENST00000449911.2

SSU72P1-201, Transcript of SSU72 pseudogene 1, humanhuman

BASIC

Gene SSU72P1, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72P1-201ENST00000449911 PRR19A6NJB7 356 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 OR52A4PA6NMU1 304 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 DNALI1O14645 258 aaPredicted RBP9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 CD3EAPO15446 510 aaKnown RBP9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 NDUFS3O75489 264 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 TMEM63AO94886 807 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 JMJD7P0C870 316 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 PRSS56P0CW18 603 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 AMD1P17707 334 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 LSSP48449 732 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 UBE2IP63279 158 aaKnown RBP9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 CYP4F3Q08477 520 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 RPA4Q13156 261 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 RTP5Q14D33 572 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 PLCL1Q15111 1095 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 ANKRD22Q5VYY1 191 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 IZUMO3Q5VZ72 239 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 METRNLQ641Q3 311 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 KLHL35Q6PF15 583 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 FAM83HQ6ZRV2 1179 aaPredicted RBP9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 TMEM26Q6ZUK4 368 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 ZNF534Q76KX8 674 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 HOOK3Q86VS8 718 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 ZNF761Q86XN6 746 aaPredicted RBP9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 PIANPQ8IYJ0 282 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 CLDN19Q8N6F1 224 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 NAT8LQ8N9F0 302 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 KDF1Q8NAX2 398 aaPredicted RBP9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 ZNF511Q8NB15 262 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 OR4D9Q8NGE8 314 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 GABPB2Q8TAK5 448 aaPredicted RBP9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 MDM1Q8TC05 714 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 SGSM3Q96HU1 749 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 C12orf66Q96MD2 445 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 ZNF778Q96MU6 729 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 CMKLR1Q99788 373 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 WWP1Q9H0M0 922 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 COG4Q9H9E3 785 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 RDH14Q9HBH5 336 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 THSD1Q9NS62 852 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 TREX1Q9NSU2 369 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 IMP3Q9NV31 184 aaKnown RBP9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 DKK4Q9UBT3 224 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 PSMD13Q9UNM6 376 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 SATB2Q9UPW6 733 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 NEU2Q9Y3R4 380 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 MAD1L1Q9Y6D9 718 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 COLEC10Q9Y6Z7 277 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 MYLKQ15746 1914 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 ARID1BQ8NFD5 2236 aaPredicted RBP9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 FREM2Q5SZK8 3169 aa9.36□□□□□ -0.91
SSU72P1-201ENST00000449911 FAM237BA0A1B0GVD1 139 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 LIN7AO14910 233 aaPredicted RBP9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 PLD2O14939 933 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 HGSO14964 777 aaPredicted RBP9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 CAPN5O15484 640 aaPredicted RBP9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 B4GAT1O43505 415 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 BRINP1O60477 761 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 AVILO75366 819 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 UBXN7O94888 489 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 VAPBO95292 243 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 MPOP05164 745 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 POLBP06746 335 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 MTHFD1P11586 935 aaKnown RBP9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 BRAFP15056 766 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 VARSP26640 1264 aaKnown RBP9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 NDUFS1P28331 727 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 NMBRP28336 390 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 CD1CP29017 333 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 PDX1P52945 283 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 PLOD1Q02809 727 aaPredicted RBP9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 CKAP4Q07065 602 aaKnown RBP9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 SQSTM1Q13501 440 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 TRA2AQ13595 282 aaKnown RBP eCLIP9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 THOC5Q13769 683 aaKnown RBP9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 BOP1Q14137 746 aaKnown RBP9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 CLCA4Q14CN2 919 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 MORF4L2Q15014 288 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 TMED2Q15363 201 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 RPE65Q16518 533 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 KCTD19Q17RG1 926 aaPredicted RBP9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 RNASEH2BQ5TBB1 312 aaKnown RBP9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 NKAIN2Q5VXU1 208 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 PTRHD1Q6GMV3 140 aaKnown RBP9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 KIAA0930Q6ICG6 404 aaPredicted RBP9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 TMEM71Q6P5X7 295 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 WDR74Q6RFH5 385 aaPredicted RBP9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 LYPD8Q6UX82 237 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 USP53Q70EK8 1073 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 RAB11FIP2Q7L804 512 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 MAATS1Q7Z4T9 603 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 B3GNT8Q7Z7M8 397 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 CAND1Q86VP6 1230 aaKnown RBP9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 LRRC6Q86X45 466 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 JAMLQ86YT9 394 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 PLXDC1Q8IUK5 500 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 FBXO39Q8N4B4 442 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 GSDMBQ8TAX9 411 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 NAT14Q8WUY8 206 aa9.35□□□□□ -0.91
SSU72P1-201ENST00000449911 NCSTNQ92542 709 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms