RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 A0A1W2PQH9 124 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 MGAT4DA6NG13 374 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 F5H5T6 163 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 COQ9O75208 318 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 VPS4BO75351 444 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 KRT6AP02538 564 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 KRT6BP04259 564 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 ITPKAP23677 461 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 PBLDP30039 288 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-204ENST00000449510 TGFBR1P36897 503 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 ALDH3B2P48448 385 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 KRT6CP48668 564 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 INCA1Q0VD86 236 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 TPRG1LQ5T0D9 272 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 UGT3A1Q6NUS8 523 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 BORAQ6PGQ7 559 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 CCBE1Q6UXH8 406 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-204ENST00000449510 RIOX2Q8IUF8 465 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 PACRGLQ8N7B6 248 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 ATP6V0D2Q8N8Y2 350 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 ATAD1Q8NBU5 361 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 SUN5Q8TC36 379 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 SLC13A3Q8WWT9 602 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 MYRFLQ96LU7 910 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 IL4I1Q96RQ9 567 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 TMEM245Q9H330 911 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 TP63Q9H3D4 680 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-204ENST00000449510 DNAJB9Q9UBS3 223 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 CLEC4AQ9UMR7 237 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 PCDHGA3Q9Y5H0 932 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 PARP4Q9UKK3 1724 aaKnown RBP12.23□□□□□ -0.45
UBE3B-204ENST00000449510 FAM25AB3EWG3 89 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 FAM25CB3EWG5 89 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 FAM25GB3EWG6 89 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 TREHO43280 583 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 DNAJB2P25686 324 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 IDUAP35475 653 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 CCT3P49368 545 aaKnown RBP12.23□□□□□ -0.45
UBE3B-204ENST00000449510 TMBIM6P55061 237 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 TAZQ16635 292 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 KIAA0930Q6ICG6 404 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-204ENST00000449510 SDE2Q6IQ49 451 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 CYP4V2Q6ZWL3 525 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-204ENST00000449510 ZNF598Q86UK7 904 aaKnown RBP12.23□□□□□ -0.45
UBE3B-204ENST00000449510 SPARTQ8N0X7 666 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 ATL1Q8WXF7 558 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 PTERQ96BW5 349 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 ATG10Q9H0Y0 220 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 ADPRHL2Q9NX46 363 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 MARCH2Q9P0N8 246 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 RAPGEFL1Q9UHV5 662 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 PHRF1Q9P1Y6 1649 aaKnown RBP12.22□□□□□ -0.45
UBE3B-204ENST00000449510 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-204ENST00000449510 TCRBV3S1A0A5B6 114 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 MEIS3P2A8K0S8 358 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 BTBD19C9JJ37 291 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 F8W810 466 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 VIPP01282 170 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 UMPSP11172 480 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 ZNF24P17028 368 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 PAFAH1B3Q15102 231 aaKnown RBP12.22□□□□□ -0.45
UBE3B-204ENST00000449510 TIGD6Q17RP2 521 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 SPDYE7PQ495Y7 208 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 ATAD3BQ5T9A4 648 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 FAM131AQ6UXB0 335 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 CCDC149Q6ZUS6 474 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 CADM3Q8N126 398 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 CARNMT1Q8N4J0 409 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 DTWD1Q8N5C7 304 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 KRTCAP2Q8N6L1 136 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 VPS37AQ8NEZ2 397 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 EEF1AKMT1Q8WVE0 214 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 KHSRPQ92945 711 aaKnown RBP eCLIP12.22□□□□□ -0.45
UBE3B-204ENST00000449510 HNRNPABQ99729 332 aaKnown RBP12.22□□□□□ -0.45
UBE3B-204ENST00000449510 ADGRE3Q9BY15 652 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 ASB8Q9H765 288 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 FAM118AQ9NWS6 357 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 TMEM181Q9P2C4 612 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 FKBPLQ9UIM3 349 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 SLC9A8Q9Y2E8 581 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 TMED5Q9Y3A6 229 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 CCDC182A6NF36 153 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 PER2O15055 1255 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 AP1G1O43747 822 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 DDNO94850 711 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-204ENST00000449510 C8BP07358 591 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 TSPAN19P0C672 248 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 CCNCP24863 283 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 CYP2C18P33260 490 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 SOX4Q06945 474 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-204ENST00000449510 OR4D1Q15615 310 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 SLC36A3Q495N2 470 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 TRIQKQ629K1 86 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 ISCA2Q86U28 154 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 ANKRD13BQ86YJ7 626 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 FUNDC1Q8IVP5 155 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 SLC22A15Q8IZD6 547 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 PDPRQ8NCN5 879 aa12.22□□□□□ -0.45
UBE3B-204ENST00000449510 WDR36Q8NI36 951 aaKnown RBP12.22□□□□□ -0.45
UBE3B-204ENST00000449510 TMEM246Q9BRR3 403 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms