RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 PHF19Q5T6S3 580 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 ANKRD22Q5VYY1 191 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 CASC4Q6P4E1 433 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 B3GNT8Q7Z7M8 397 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 PIANPQ8IYJ0 282 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 OR10G6Q8NH81 332 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 PEX13Q92968 403 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 LIN37Q96GY3 246 aaPredicted RBP14.28□□□□□ -0.12
USP39-206ENST00000448971 TTC1Q99614 292 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.28□□□□□ -0.12
USP39-206ENST00000448971 STRADBQ9C0K7 418 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 CHRAC1Q9NRG0 131 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 KCND1Q9NSA2 647 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 SCHIP1Q9P0W5 487 aaPredicted RBP14.28□□□□□ -0.12
USP39-206ENST00000448971 SAMD15Q9P1V8 674 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 ANAPC5Q9UJX4 755 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 PSMD13Q9UNM6 376 aa14.28□□□□□ -0.12
USP39-206ENST00000448971 DNMT3AQ9Y6K1 912 aaPredicted RBP14.28□□□□□ -0.12
USP39-206ENST00000448971 IGHV1OR21-1A0A087WYE8 117 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 KLHL33A6NCF5 533 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 MGAT4DA6NG13 374 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 AGRPO00253 132 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 B4GAT1O43505 415 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 SLC35G4P0C7Q5 338 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 CASQ1P31415 396 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 NSG1P42857 185 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 MAGEA6P43360 314 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 UBE2IP63279 158 aaKnown RBP14.27□□□□□ -0.13
USP39-206ENST00000448971 GPLD1P80108 840 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 ACVR1Q04771 509 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 PTK6Q13882 451 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 AARS2Q5JTZ9 985 aaKnown RBP14.27□□□□□ -0.13
USP39-206ENST00000448971 AGAP9Q5VTM2 703 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 NKAIN2Q5VXU1 208 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 FAM83HQ6ZRV2 1179 aaPredicted RBP14.27□□□□□ -0.13
USP39-206ENST00000448971 PIM3Q86V86 326 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 CREG2Q8IUH2 290 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 OR2L2Q8NH16 312 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 OR4L1Q8NH43 312 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 HM13Q8TCT9 377 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 RUNDC3BQ96NL0 473 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 NUDT22Q9BRQ3 303 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 XAB2Q9HCS7 855 aaKnown RBP14.27□□□□□ -0.13
USP39-206ENST00000448971 CATSPERZQ9NTU4 200 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 IMP3Q9NV31 184 aaKnown RBP14.27□□□□□ -0.13
USP39-206ENST00000448971 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.27□□□□□ -0.13
USP39-206ENST00000448971 ACSL6Q9UKU0 697 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 NEU2Q9Y3R4 380 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 PCDHGA7Q9Y5G6 932 aa14.27□□□□□ -0.13
USP39-206ENST00000448971 DOPEY2Q9Y3R5 2298 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 IGLV3-16A0A075B6K0 115 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 LILRA5A6NI73 299 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 PRR19A6NJB7 356 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 TMX2-CTNND1H3BSU7 103 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 CCDC188H7C350 402 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 QSOX1O00391 747 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 PLD2O14939 933 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 FANCGO15287 622 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 BRAFP15056 766 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 PSMA3P25788 255 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 NMBRP28336 390 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 SLC5A2P31639 672 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 CCKBRP32239 447 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 CSF2RBP32927 897 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 PPARGP37231 505 aaPredicted RBP14.26□□□□□ -0.13
USP39-206ENST00000448971 EPHA4P54764 986 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 DR1Q01658 176 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 TGIF1Q15583 401 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 LYPLAL1Q5VWZ2 237 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 ABRAXAS1Q6UWZ7 409 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 WASH2PQ6VEQ5 465 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 SYT10Q6XYQ8 523 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 CERS6Q6ZMG9 384 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 USP53Q70EK8 1073 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 PPIL6Q8IXY8 311 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 CLDN19Q8N6F1 224 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 LINC00615Q96LM1 132 aaPredicted RBP14.26□□□□□ -0.13
USP39-206ENST00000448971 SERPINB12Q96P63 405 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 TBC1D10AQ9BXI6 508 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 WWP1Q9H0M0 922 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 MRM3Q9HC36 420 aaKnown RBP14.26□□□□□ -0.13
USP39-206ENST00000448971 WASH6PQ9NQA3 447 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 RNF14Q9UBS8 474 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 SOX13Q9UN79 622 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 WDR37Q9Y2I8 494 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 NBASA2RRP1 2371 aa14.26□□□□□ -0.13
USP39-206ENST00000448971 ARHGEF17Q96PE2 2063 aaPredicted RBP14.26□□□□□ -0.13
USP39-206ENST00000448971 F8W8V4 182 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 SGTAO43765 313 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 AVILO75366 819 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 AP2A2O94973 939 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 FTH1P02794 183 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 POLBP06746 335 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 MLNP12872 115 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 ITGB6P18564 788 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 XRCC1P18887 633 aaPredicted RBP14.25□□□□□ -0.13
USP39-206ENST00000448971 PAMP19021 973 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 CD1CP29017 333 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 SLC19A1P41440 591 aa14.25□□□□□ -0.13
USP39-206ENST00000448971 CSRP3P50461 194 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms