RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 CHI3L1P36222 383 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 RPL7AP62424 266 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 FMO1Q01740 532 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 TRADDQ15628 312 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 LIX1LQ8IVB5 337 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 MPP5Q8N3R9 675 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 NLGN4YQ8NFZ3 816 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 MDM1Q8TC05 714 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 CLEC4CQ8WTT0 213 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 CRYGNQ8WXF5 182 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 ELF4Q99607 663 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 KLF16Q9BXK1 252 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 PCDH18Q9HCL0 1135 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 AMACRQ9UHK6 382 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 PLCL2Q9UPR0 1127 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 MRPS2Q9Y399 296 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 NSG1A0A0A6YYJ2 146 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 FAM90A27PA6NNH2 459 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 H0YC42 278 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 PDGFBP01127 241 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 RBL1P28749 1068 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 CCNFP41002 786 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 NSG1P42857 185 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 TPMTP51580 245 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 CLDN2P57739 230 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 YPEL5P62699 121 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 ST3GAL1Q11201 340 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 GRIK2Q13002 908 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZNF311Q5JNZ3 666 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 Q6ZVL8 140 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 FAM9CQ8IZT9 166 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 TAGAPQ8N103 731 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 MMABQ96EY8 250 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 IL22Q9GZX6 179 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 ADAM19Q9H013 955 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 PCBD2Q9H0N5 130 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 RIC8BQ9NVN3 520 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 ANKMY1Q9P2S6 941 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 SNX10Q9Y5X0 201 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 KLHL33A6NCF5 533 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 A8MVJ9 347 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 HOXC11O43248 304 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 PROS1P07225 676 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 MLC1Q15049 377 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 CSRP2Q16527 193 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 TCHHL1Q5QJ38 904 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 VASH2Q86V25 355 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 MFSD2AQ8NA29 543 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 NETO2Q8NC67 525 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 MIEF2Q96C03 454 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 ACTR5Q9H9F9 607 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 DYNLRB1Q9NP97 96 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 HPF1Q9NWY4 346 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 TBK1Q9UHD2 729 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 CCL26Q9Y258 94 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZDHHC9Q9Y397 364 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 SEC16AO15027 2179 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 GABRDO14764 452 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 IRF2P14316 349 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 POLR2CP19387 275 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 IL32P24001 234 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 MAPK1P28482 360 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 CDC25BP30305 580 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 ACVRL1P37023 503 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 HSD17B2P37059 387 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 CDK16Q00536 496 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 CACNG1Q06432 222 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 C1DQ13901 141 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 NR1I3Q14994 352 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 MUM1Q2TAK8 710 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 COL28A1Q2UY09 1125 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 ANKRD20A1Q5TYW2 823 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 PDPK2PQ6A1A2 396 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 POTEHQ6S545 545 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 PAGE2Q7Z2X7 111 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 TMEM178AQ8NBL3 297 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZNF516Q92618 1163 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 ZDHHC16Q969W1 377 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 PIGVQ9NUD9 493 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 ACSL5Q9ULC5 683 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 FZD4Q9ULV1 537 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 LOXL2Q9Y4K0 774 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 DNMT3AQ9Y6K1 912 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 FYNP06241 537 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 DNASE1P24855 282 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 MRPS22P82650 360 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 GPR33Q49SQ1 333 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 ANKRD20A4Q4UJ75 823 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 ICE2Q659A1 982 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 PEG10Q86TG7 708 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 ANKMY2Q8IV38 441 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 LRRC8AQ8IWT6 810 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 NKAPQ8N5F7 415 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 SLC5A8Q8N695 610 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 SNX33Q8WV41 574 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 KCTD4Q8WVF5 259 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 EZH1Q92800 747 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 NCLNQ969V3 563 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 CNTNAP3BQ96NU0 1288 aa5.55□□□□□ -1.52
CDC42BPA-209ENST00000448940 CHP1Q99653 195 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms