RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 DUS1LQ6P1R4 473 aaKnown RBP12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 LRRC8BQ6P9F7 803 aa12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 ZNF534Q76KX8 674 aa12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 FAM129CQ86XR2 697 aa12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 BMPERQ8N8U9 685 aa12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 PPHLN1Q8NEY8 458 aaKnown RBP12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 OR4L1Q8NH43 312 aa12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 ACTRT1Q8TDG2 376 aa12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 PEX13Q92968 403 aa12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 SGSM3Q96HU1 749 aa12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 RMDN2Q96LZ7 410 aa12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 TGM7Q96PF1 710 aa12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 NAP1L3Q99457 506 aaPredicted RBP12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 OR52A5Q9H2C5 316 aa12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 COG4Q9H9E3 785 aa12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 CPNE5Q9HCH3 593 aa12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 SLC39A1Q9NY26 324 aa12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 SNX12Q9UMY4 172 aa12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 NEU2Q9Y3R4 380 aa12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 PCDHGA3Q9Y5H0 932 aa12.45□□□□□ -0.42
PRPF40A-203ENST00000448428 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 B4E171 279 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 AP3B1O00203 1094 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 KIF1CO43896 1103 aaKnown RBP12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 OR1I1O60431 355 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 ANKRD34CP0C6C1 535 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 MGAT1P26572 445 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 NMBRP28336 390 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 PDHA2P29803 388 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 TSPAN7P41732 249 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 MAGEA6P43360 314 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 CAPZBP47756 277 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 CXADRP78310 365 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 PRAMEP78395 509 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 MC2RQ01718 297 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 SEMA3AQ14563 771 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 KCNJ11Q14654 390 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 FASTKD1Q53R41 847 aaKnown RBP12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 LYPLAL1Q5VWZ2 237 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 CCDC137Q6PK04 289 aaKnown RBP12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 AFTPHQ6ULP2 937 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 PACS1Q6VY07 963 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 ZFPM2Q8WW38 1151 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 FCRL3Q96P31 734 aaPredicted RBP12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 DDA1Q9BW61 102 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 IL22Q9GZX6 179 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 RAB33BQ9H082 229 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 VPS37BQ9H9H4 285 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 FBXO8Q9NRD0 319 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 TREX1Q9NSU2 369 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 BFARQ9NZS9 450 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 EPHA6Q9UF33 1036 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 SLC24A2Q9UI40 661 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 B3GALT1Q9Y5Z6 326 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 COLEC10Q9Y6Z7 277 aa12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 DSPP15924 2871 aaKnown RBP12.44□□□□□ -0.42
PRPF40A-203ENST00000448428 CES2O00748 559 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 TOX3O15405 576 aaPredicted RBP12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 EFSO43281 561 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 AVILO75366 819 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 GSTM1P09488 218 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 LIPCP11150 499 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 CD82P27701 267 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 PREPP48147 710 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 CD151P48509 253 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 SEPHS1P49903 392 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 UCNP55089 124 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 TMPRSS3P57727 454 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 PPP1CAP62136 330 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 GSTM4Q03013 218 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 RPA4Q13156 261 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 KRT33BQ14525 404 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 PLCL1Q15111 1095 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 DCAF12Q5T6F0 453 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 CACHD1Q5VU97 1274 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 ANKRD22Q5VYY1 191 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 ANKS6Q68DC2 871 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 IRGCQ6NXR0 463 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 CERS6Q6ZMG9 384 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 FAM92BQ6ZTR7 304 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 LDB1Q86U70 411 aaPredicted RBP12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 DTX1Q86Y01 620 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 PHC3Q8NDX5 983 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 CPT1BQ92523 772 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 ZDHHC12Q96GR4 267 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 FERD3LQ96RJ6 166 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 TTC1Q99614 292 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 CTRCQ99895 268 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 KIFC1Q9BW19 673 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 ASPSCR1Q9BZE9 553 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 KIR3DX1Q9H7L2 352 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 APMAPQ9HDC9 416 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 WDR70Q9NW82 654 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 SYBUQ9NX95 663 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 MARCH4Q9P2E8 410 aaPredicted RBP12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 PYCARDQ9ULZ3 195 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 HEBP2Q9Y5Z4 205 aa12.43□□□□□ -0.42
PRPF40A-203ENST00000448428 PTPRQQ9UMZ3 2332 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms