RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 SUCOQ9UBS9 1254 aaKnown RBP6.91□□□□□ -1.3
LRRC28-203ENST00000447360 RPL26L1Q9UNX3 145 aaKnown RBP6.91□□□□□ -1.3
LRRC28-203ENST00000447360 BTRCQ9Y297 605 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 DNAJC16Q9Y2G8 782 aa6.91□□□□□ -1.3
LRRC28-203ENST00000447360 C1orf232A0A0U1RR37 186 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 OR5K3A6NET4 321 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 KCNN4O15554 427 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 KCNJ13O60928 360 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 JRKO75564 520 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 FAM155BO75949 473 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 SNRPB2P08579 225 aaKnown RBP6.9□□□□□ -1.3
LRRC28-203ENST00000447360 VCLP18206 1134 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 AGXTP21549 392 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 CA4P22748 312 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 PBX1P40424 430 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 DRG2P55039 364 aaKnown RBP6.9□□□□□ -1.3
LRRC28-203ENST00000447360 ABRQ12979 859 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 CDC16Q13042 620 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 AIMP2Q13155 320 aaKnown RBP6.9□□□□□ -1.3
LRRC28-203ENST00000447360 ZNF169Q14929 603 aaPredicted RBP6.9□□□□□ -1.3
LRRC28-203ENST00000447360 TLR1Q15399 786 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 PLA2G4EQ3MJ16 856 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 ZNF789Q5FWF6 425 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 PPP6R3Q5H9R7 873 aaPredicted RBP6.9□□□□□ -1.3
LRRC28-203ENST00000447360 ZNF569Q5MCW4 686 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 PRAMEF17Q5VTA0 474 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 E4F1Q66K89 784 aaPredicted RBP6.9□□□□□ -1.3
LRRC28-203ENST00000447360 ALG1LQ6GMV1 187 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 RPUSD3Q6P087 351 aaKnown RBP6.9□□□□□ -1.3
LRRC28-203ENST00000447360 DCUN1D2Q6PH85 259 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 XKRXQ6PP77 449 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 CRTC3Q6UUV7 619 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 FAM180AQ6UWF9 173 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 MON1BQ7L1V2 547 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 LRRC49Q8IUZ0 686 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 ZNF547Q8IVP9 402 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 TEX26Q8N6G2 289 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 BCORP1Q8N888 145 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 DNAJB14Q8TBM8 379 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 ZFPM2Q8WW38 1151 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 GLYATL1Q969I3 302 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 NACC2Q96BF6 587 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 C14orf79Q96F83 325 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 CCDC120Q96HB5 630 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 KCTD15Q96SI1 283 aaPredicted RBP6.9□□□□□ -1.3
LRRC28-203ENST00000447360 ZSCAN5AQ9BUG6 496 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 SNRNP25Q9BV90 132 aaKnown RBP6.9□□□□□ -1.3
LRRC28-203ENST00000447360 TDRD1Q9BXT4 1180 aaKnown RBP6.9□□□□□ -1.3
LRRC28-203ENST00000447360 POLR1EQ9GZS1 481 aaKnown RBP6.9□□□□□ -1.3
LRRC28-203ENST00000447360 ZWILCHQ9H900 591 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 NT5MQ9NPB1 228 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 OLAHQ9NV23 265 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 HRASLS2Q9NWW9 162 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 SOHLH2Q9NX45 425 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 P4HTMQ9NXG6 502 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 TAS2R14Q9NYV8 317 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 AIPL1Q9NZN9 384 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 CWC15Q9P013 229 aaKnown RBP6.9□□□□□ -1.3
LRRC28-203ENST00000447360 SERTAD3Q9UJW9 196 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 MYO6Q9UM54 1294 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 CHKBQ9Y259 395 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 WDR37Q9Y2I8 494 aa6.9□□□□□ -1.3
LRRC28-203ENST00000447360 SEC16AO15027 2179 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 VPS13CQ709C8 3753 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 SLC9B1P1A6NJY1 282 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 LRRC53A6NM62 1247 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 PCDH17O14917 1159 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 LDB2O43679 373 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 ICMTO60725 284 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 CDK14O94921 469 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 PRLP01236 227 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 HBQ1P09105 142 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 FERP16591 822 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 CYP2A7P20853 494 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 AGAP20933 346 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 IL4RP24394 825 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 PRKCIP41743 596 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 DCDC1P59894 354 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 FANCCQ00597 558 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 OGDHQ02218 1023 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 ASIC2Q16515 512 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 RPE65Q16518 533 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 HIF1AQ16665 826 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.89□□□□□ -1.31
LRRC28-203ENST00000447360 PTCHD3Q3KNS1 767 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 FILIP1LQ4L180 1135 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 ZNF648Q5T619 568 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-203ENST00000447360 AGAP7PQ5VUJ5 663 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 ZNF324BQ6AW86 544 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-203ENST00000447360 ACAD10Q6JQN1 1059 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 BRICD5Q6PL45 260 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 TMCO3Q6UWJ1 677 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 ZNF571Q7Z3V5 609 aaPredicted RBP6.89□□□□□ -1.31
LRRC28-203ENST00000447360 C11orf96Q7Z7L8 435 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 LUZP1Q86V48 1076 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 OOSP2Q86WS3 158 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 MCOLN2Q8IZK6 566 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 MMP21Q8N119 569 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 ATPAF2Q8N5M1 289 aa6.89□□□□□ -1.31
LRRC28-203ENST00000447360 TRAM1L1Q8N609 369 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms