RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 C1orf52Q8N6N3 182 aaKnown RBP4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 KBTBD3Q8NAB2 608 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 POC1AQ8NBT0 407 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 KCNH5Q8NCM2 988 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 RBM15BQ8NDT2 890 aaKnown RBP4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 TMEM255BQ8WV15 326 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 SECTM1Q8WVN6 248 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 ABHD1Q96SE0 405 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 CDRT15Q96T59 188 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 RTN4RQ9BZR6 473 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 RETREG1Q9H6L5 497 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 PSD3Q9NYI0 1048 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 TAS2R14Q9NYV8 317 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 GAGE2DQ9UEU5 116 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 AMACRQ9UHK6 382 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 HACL1Q9UJ83 578 aa4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 GREB1LQ9C091 1923 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P6-201ENST00000444896 UNC13BO14795 1591 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 TTC37Q6PGP7 1564 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 CLASP1Q7Z460 1538 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 SYCP2Q9BX26 1530 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 UHRF1BP1LA0JNW5 1464 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 RALGAPBQ86X10 1494 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 ROCK2O75116 1388 aaKnown RBP4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 GPR75-ASB3A0A0A6YYF3 556 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 GLOD5A6NK44 160 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 TO15178 435 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 ZWINTO95229 277 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 IL11P20809 199 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 NR2F2P24468 414 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 AMPHP49418 695 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 RPL24P83731 157 aaKnown RBP4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 TROAPQ12815 778 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 IRAK1BP1Q5VVH5 260 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 WBP2NLQ6ICG8 309 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 FOXL2NBQ6ZUU3 175 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 C9orf139Q6ZV77 190 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 SLC9B2Q86UD5 537 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 GBGT1Q8N5D6 347 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 MINDY1Q8N5J2 469 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 TAS1R2Q8TE23 839 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 TMCO6Q96DC7 493 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 ERLEC1Q96DZ1 483 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 GCNAQ96QF7 691 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 SPATC1LQ9H0A9 340 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 SLA2Q9H6Q3 261 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 CLIC5Q9NZA1 410 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 MARCH4Q9P2E8 410 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 CHORDC1Q9UHD1 332 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 ZNF148Q9UQR1 794 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 WBP11Q9Y2W2 641 aaKnown RBP4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 RABGAP1Q9Y3P9 1069 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 MAGED1Q9Y5V3 778 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 SCN5AQ14524 2016 aa4.32□□□□□ -1.72
HMGB3P6-201ENST00000444896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 DUOX2Q9NRD8 1548 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 FAM135AQ9P2D6 1515 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 UHRF1BP1Q6BDS2 1440 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 ERBINQ96RT1 1412 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 USP47Q96K76 1375 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 A0A1W2PS18 150 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 PRSS44E7EML9 344 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 DGKAP23743 735 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 RPL36AP83881 106 aaKnown RBP4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 ARL16Q0P5N6 197 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 C15orf59Q2T9L4 293 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 BMP2KLQ5H9B9 411 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 ALS2CLQ60I27 953 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 PLEKHM3Q6ZWE6 761 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 HAUS6Q7Z4H7 955 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 EXOC3L1Q86VI1 746 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 DNAAF5Q86Y56 855 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 CIARTQ8N365 385 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 RFLNBQ8N5W9 214 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 LSMEM1Q8N8F7 131 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 CD101Q93033 1021 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 LINGO1Q96FE5 620 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 LMLNQ96KR4 655 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 POLR3CQ9BUI4 534 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 VPS33BQ9H267 617 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 DENND2DQ9H6A0 471 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 DONSONQ9NYP3 566 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 NKIRAS2Q9NYR9 191 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 KCNG2Q9UJ96 466 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 ZNF112Q9UJU3 913 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 YIPF1Q9Y548 306 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 ZCCHC11Q5TAX3 1644 aaKnown RBP4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 KDM5CP41229 1560 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 ARAP3Q8WWN8 1544 aa4.31□□□□□ -1.72
HMGB3P6-201ENST00000444896 CCDC144AA2RUR9 1427 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 SPATA31E1Q6ZUB1 1445 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 LOC100509620A0A075B734 347 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 A0A0G2JNG1 304 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 TEX13DA0A0J9YY54 714 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 EME2A4GXA9 379 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 HEPACAM2A8MVW5 462 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 MAGEB17A8MXT2 336 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 ANKRD66B4E2M5 251 aa4.3□□□□□ -1.72
HMGB3P6-201ENST00000444896 FIBPO43427 364 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms