RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 IMP3Q9NV31 184 aaKnown RBP13.82□□□□□ -0.2
SSBP3-208ENST00000444533 KCNK4Q9NYG8 393 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 ST14Q9Y5Y6 855 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 PRSS21Q9Y6M0 314 aa13.82□□□□□ -0.2
SSBP3-208ENST00000444533 SGTAO43765 313 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 SLU7O95391 586 aaKnown RBP13.81□□□□□ -0.2
SSBP3-208ENST00000444533 S1PR4O95977 384 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 RPN2P04844 631 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 MYF5P13349 255 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 PKMP14618 531 aaKnown RBP13.81□□□□□ -0.2
SSBP3-208ENST00000444533 ITGB6P18564 788 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 CD151P48509 253 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 HSPA14Q0VDF9 509 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 SPIDRQ14159 915 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 SLMAPQ14BN4 828 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 FASTKD3Q14CZ7 662 aaKnown RBP13.81□□□□□ -0.2
SSBP3-208ENST00000444533 TRADDQ15628 312 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 TTC23LQ6PF05 361 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 Q8N9G6 341 aaPredicted RBP13.81□□□□□ -0.2
SSBP3-208ENST00000444533 C2CD4AQ8NCU7 369 aaPredicted RBP13.81□□□□□ -0.2
SSBP3-208ENST00000444533 NAT14Q8WUY8 206 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 PATE1Q8WXA2 126 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 FOPNLQ96NB1 174 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 WWP1Q9H0M0 922 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 P2RY12Q9H244 342 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 EPB41L1Q9H4G0 881 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 ZDHHC18Q9NUE0 388 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 CORO1CQ9ULV4 474 aaPredicted RBP13.81□□□□□ -0.2
SSBP3-208ENST00000444533 RNF215Q9Y6U7 377 aa13.81□□□□□ -0.2
SSBP3-208ENST00000444533 DMXL1Q9Y485 3027 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 LY6G6EA0A0G2JKS1 128 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 A6NCN8 305 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 PCNX2A6NKB5 2137 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 OPA1O60313 960 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 VPS26AO75436 327 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 TCEA3O75764 348 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 MTHFD1P11586 935 aaKnown RBP13.8□□□□□ -0.2
SSBP3-208ENST00000444533 JUPP14923 745 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 LEPRP48357 1165 aaKnown RBP13.8□□□□□ -0.2
SSBP3-208ENST00000444533 GPLD1P80108 840 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 PLCL1Q15111 1095 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 RPE65Q16518 533 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 TEDDM1Q5T9Z0 273 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 N4BP2L1Q5TBK1 243 aaPredicted RBP13.8□□□□□ -0.2
SSBP3-208ENST00000444533 KLHL35Q6PF15 583 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 DHRS13Q6UX07 377 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 FAM83HQ6ZRV2 1179 aaPredicted RBP13.8□□□□□ -0.2
SSBP3-208ENST00000444533 GALNT7Q86SF2 657 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 SLCO6A1Q86UG4 719 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 SLC26A11Q86WA9 606 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 TMPRSS12Q86WS5 348 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 C17orf82Q86X59 251 aaPredicted RBP13.8□□□□□ -0.2
SSBP3-208ENST00000444533 CNTN4Q8IWV2 1026 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 CTAGE3PQ8IX95 158 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 PNPLA1Q8N8W4 532 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 ZFPM2Q8WW38 1151 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 ADAMTS14Q8WXS8 1223 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 CCDC97Q96F63 343 aaPredicted RBP13.8□□□□□ -0.2
SSBP3-208ENST00000444533 C9orf72Q96LT7 481 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 GFM1Q96RP9 751 aaKnown RBP13.8□□□□□ -0.2
SSBP3-208ENST00000444533 DPYSL5Q9BPU6 564 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 TAS2R13Q9NYV9 303 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 U3KQA8 63 aa13.8□□□□□ -0.2
SSBP3-208ENST00000444533 GOLGA4Q13439 2230 aaKnown RBP13.79□□□□□ -0.2
SSBP3-208ENST00000444533 OR52A4PA6NMU1 304 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 IQCF5A8MTL0 148 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 TMX2-CTNND1H3BSU7 103 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 DUX1O43812 170 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 HAUS5O94927 633 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 EML2O95834 649 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 RPLP0P05388 317 aaKnown RBP13.79□□□□□ -0.2
SSBP3-208ENST00000444533 AMD1P17707 334 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 MCM3P25205 808 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 SSTR1P30872 391 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 SKIV2L2P42285 1042 aaKnown RBP13.79□□□□□ -0.2
SSBP3-208ENST00000444533 PREPP48147 710 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 EPHA4P54764 986 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 SLC12A2P55011 1212 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 CSE1LP55060 971 aaKnown RBP13.79□□□□□ -0.2
SSBP3-208ENST00000444533 MPP1Q00013 466 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 FOXC1Q12948 553 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 CLCA4Q14CN2 919 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 CLPPQ16740 277 aaPredicted RBP13.79□□□□□ -0.2
SSBP3-208ENST00000444533 AMZ1Q400G9 498 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 MAP9Q49MG5 647 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 PERM1Q5SV97 790 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 PLEKHS1Q5SXH7 462 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 RBM44Q6ZP01 1051 aaKnown RBP13.79□□□□□ -0.2
SSBP3-208ENST00000444533 MICALCLQ6ZW33 695 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 CYS1Q717R9 158 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 SPRED1Q7Z699 444 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 STRA8Q7Z7C7 330 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 PDZD3Q86UT5 571 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 UNC5BQ8IZJ1 945 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 KRT222Q8N1A0 295 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 EIF1ADQ8N9N8 165 aaKnown RBP13.79□□□□□ -0.2
SSBP3-208ENST00000444533 UBXN4Q92575 508 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 TFGQ92734 400 aaPredicted RBP13.79□□□□□ -0.2
SSBP3-208ENST00000444533 KCNJ9Q92806 393 aa13.79□□□□□ -0.2
SSBP3-208ENST00000444533 DEPDC7Q96QD5 511 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms