RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 ZIC2O95409 532 aaPredicted RBP13.72□□□□□ -0.21
TREX1-202ENST00000444177 ACRV1P26436 265 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 VPS41P49754 854 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 CDKN1CP49918 316 aaPredicted RBP13.72□□□□□ -0.21
TREX1-202ENST00000444177 TERF1P54274 439 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 CACNG1Q06432 222 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 TBR1Q16650 682 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 GPR33Q49SQ1 333 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 AGAP9Q5VTM2 703 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 ABRAXAS1Q6UWZ7 409 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 C4orf22Q6V702 233 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 FAM83HQ6ZRV2 1179 aaPredicted RBP13.72□□□□□ -0.21
TREX1-202ENST00000444177 TMEM26Q6ZUK4 368 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 SERPINA9Q86WD7 417 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 PLXDC1Q8IUK5 500 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 CACNA2D3Q8IZS8 1091 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 IL22RA1Q8N6P7 574 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 PPHLN1Q8NEY8 458 aaKnown RBP13.72□□□□□ -0.21
TREX1-202ENST00000444177 ACTRT1Q8TDG2 376 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 HEXDCQ8WVB3 486 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 CDKN2AIPNLQ96HQ2 116 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 TEFMQ96QE5 360 aaKnown RBP13.72□□□□□ -0.21
TREX1-202ENST00000444177 NAPGQ99747 312 aaPredicted RBP13.72□□□□□ -0.21
TREX1-202ENST00000444177 CTRCQ99895 268 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 ARHGAP9Q9BRR9 750 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 AP1M1Q9BXS5 423 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 SPRY4Q9C004 299 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 UCK1Q9HA47 277 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 CASS4Q9NQ75 786 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 EIF2B3Q9NR50 452 aaKnown RBP13.72□□□□□ -0.21
TREX1-202ENST00000444177 FBXO8Q9NRD0 319 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 ZDHHC3Q9NYG2 299 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 KLHL3Q9UH77 587 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 PSMD13Q9UNM6 376 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 WDR37Q9Y2I8 494 aa13.72□□□□□ -0.21
TREX1-202ENST00000444177 DNMT3AQ9Y6K1 912 aaPredicted RBP13.72□□□□□ -0.21
TREX1-202ENST00000444177 MYO18BQ8IUG5 2567 aa13.71□□□□□ -0.21
TREX1-202ENST00000444177 CTAGE9A4FU28 777 aa13.71□□□□□ -0.21
TREX1-202ENST00000444177 OR51F1A6NGY5 319 aa13.71□□□□□ -0.21
TREX1-202ENST00000444177 J3QKU1 62 aa13.71□□□□□ -0.21
TREX1-202ENST00000444177 PGRMC1O00264 195 aaKnown RBP13.71□□□□□ -0.21
TREX1-202ENST00000444177 RAD1O60671 282 aa13.71□□□□□ -0.21
TREX1-202ENST00000444177 TUBB4AP04350 444 aa13.71□□□□□ -0.21
TREX1-202ENST00000444177 PRLHRP49683 370 aa13.71□□□□□ -0.21
TREX1-202ENST00000444177 SESN2P58004 480 aaPredicted RBP13.71□□□□□ -0.21
TREX1-202ENST00000444177 ETF1P62495 437 aaKnown RBP13.71□□□□□ -0.21
TREX1-202ENST00000444177 LAMB3Q13751 1172 aa13.71□□□□□ -0.21
TREX1-202ENST00000444177 CLCA4Q14CN2 919 aa13.71□□□□□ -0.21
TREX1-202ENST00000444177 TRIP13Q15645 432 aaPredicted RBP13.71□□□□□ -0.21
TREX1-202ENST00000444177 SKIDA1Q1XH10 827 aa13.71□□□□□ -0.21
TREX1-202ENST00000444177 TSTD2Q5T7W7 516 aa13.71□□□□□ -0.21
TREX1-202ENST00000444177 WASH2PQ6VEQ5 465 aa13.71□□□□□ -0.21
TREX1-202ENST00000444177 MAGOHBQ96A72 148 aaKnown RBP13.71□□□□□ -0.21
TREX1-202ENST00000444177 RANBP9Q96S59 729 aa13.71□□□□□ -0.21
TREX1-202ENST00000444177 SLC12A9Q9BXP2 914 aa13.71□□□□□ -0.21
TREX1-202ENST00000444177 WASH6PQ9NQA3 447 aa13.71□□□□□ -0.21
TREX1-202ENST00000444177 IMP3Q9NV31 184 aaKnown RBP13.71□□□□□ -0.21
TREX1-202ENST00000444177 OGFRQ9NZT2 677 aa13.71□□□□□ -0.21
TREX1-202ENST00000444177 SLC2A6Q9UGQ3 507 aa13.71□□□□□ -0.21
TREX1-202ENST00000444177 PILRAQ9UKJ1 303 aa13.71□□□□□ -0.21
TREX1-202ENST00000444177 TRBV5-4A0A0C4DH59 114 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 CCDC162PA2VCL2 907 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 MGAT4DA6NG13 374 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 SGTAO43765 313 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 UBXN7O94888 489 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 C9P02748 559 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 SLC35G4P0C7Q5 338 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 FAM87AP0C7U9 286 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 ATP1B2P14415 290 aaPredicted RBP13.7□□□□□ -0.22
TREX1-202ENST00000444177 LIFP15018 202 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 TYRP1P17643 537 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 AMD1P17707 334 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 ADRA1DP25100 572 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 DBN1Q16643 649 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 DUS1LQ6P1R4 473 aaKnown RBP13.7□□□□□ -0.22
TREX1-202ENST00000444177 TTC27Q6P3X3 843 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 AFTPHQ6ULP2 937 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 CEACAM20Q6UY09 585 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 PIANPQ8IYJ0 282 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 OR13J1Q8NGT2 312 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 GPR150Q8NGU9 434 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 OR2L2Q8NH16 312 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 HM13Q8TCT9 377 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 COG1Q8WTW3 980 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.7□□□□□ -0.222e-7■■■■■ 62.8
TREX1-202ENST00000444177 LINC00615Q96LM1 132 aaPredicted RBP13.7□□□□□ -0.22
TREX1-202ENST00000444177 C9orf72Q96LT7 481 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 ZPBPQ9BS86 351 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 WWP1Q9H0M0 922 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 APMAPQ9HDC9 416 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 SLC40A1Q9NP59 571 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 RNF14Q9UBS8 474 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 TCAF1Q9Y4C2 921 aa13.7□□□□□ -0.22
TREX1-202ENST00000444177 CFAP20Q9Y6A4 193 aaKnown RBP13.7□□□□□ -0.22
TREX1-202ENST00000444177 ASH1LQ9NR48 2969 aaKnown RBP13.7□□□□□ -0.22
TREX1-202ENST00000444177 MN1Q10571 1320 aaPredicted RBP13.69□□□□□ -0.22
TREX1-202ENST00000444177 IGLV3-16A0A075B6K0 115 aa13.69□□□□□ -0.22
TREX1-202ENST00000444177 GOLGA6L10A0A0M3HER8 536 aa13.69□□□□□ -0.22
TREX1-202ENST00000444177 KLHL33A6NCF5 533 aa13.69□□□□□ -0.22
TREX1-202ENST00000444177 POLR1CO15160 346 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms