RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 TLR10Q9BXR5 811 aa9.73□□□□□ -0.85
SYN3-204ENST00000441821 XPO4Q9C0E2 1151 aaKnown RBP9.73□□□□□ -0.85
SYN3-204ENST00000441821 MAGEE1Q9HCI5 957 aa9.73□□□□□ -0.85
SYN3-204ENST00000441821 PCDH18Q9HCL0 1135 aa9.73□□□□□ -0.85
SYN3-204ENST00000441821 SOHLH2Q9NX45 425 aa9.73□□□□□ -0.85
SYN3-204ENST00000441821 TMPRSS11EQ9UL52 423 aa9.73□□□□□ -0.85
SYN3-204ENST00000441821 SCINQ9Y6U3 715 aa9.73□□□□□ -0.85
SYN3-204ENST00000441821 NIPBLQ6KC79 2804 aaeCLIP9.73□□□□□ -0.85
SYN3-204ENST00000441821 OR6C74A6NCV1 312 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 TMEM150CB9EJG8 249 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 MFSD11O43934 449 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 POP7O75817 140 aaKnown RBP9.72□□□□□ -0.85
SYN3-204ENST00000441821 LCA5LO95447 670 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 FTLP02792 175 aaPredicted RBP9.72□□□□□ -0.85
SYN3-204ENST00000441821 CD63P08962 238 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 HBQ1P09105 142 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 MTHFD1P11586 935 aaKnown RBP9.72□□□□□ -0.85
SYN3-204ENST00000441821 BPIP17213 487 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 CD86P42081 329 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 TSFMP43897 325 aaKnown RBP9.72□□□□□ -0.85
SYN3-204ENST00000441821 GALNT3Q14435 633 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 PAFAH1B3Q15102 231 aaKnown RBP9.72□□□□□ -0.85
SYN3-204ENST00000441821 PTCHD3Q3KNS1 767 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 CCDC122Q5T0U0 273 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 CDKAL1Q5VV42 579 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 ZNF385CQ66K41 422 aaPredicted RBP9.72□□□□□ -0.85
SYN3-204ENST00000441821 TXNRD3NBQ6F5E7 133 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 FBXO38Q6PIJ6 1188 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 SARM1Q6SZW1 724 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 IRF2BP2Q7Z5L9 587 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 FJX1Q86VR8 437 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 OR1L3Q8NH93 324 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 PPP4R1Q8TF05 950 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 FAR1Q8WVX9 515 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 RELTQ969Z4 430 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 ZNF653Q96CK0 615 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 PPM1MQ96MI6 270 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 AGAP3Q96P47 875 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 C17orf62Q9BQA9 187 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 SLC7A5P2Q9GIP4 190 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 MRPL47Q9HD33 250 aaKnown RBP9.72□□□□□ -0.85
SYN3-204ENST00000441821 C1GALT1Q9NS00 363 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 P4HTMQ9NXG6 502 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 SERTAD3Q9UJW9 196 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 PSMD13Q9UNM6 376 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 NOVA2Q9UNW9 492 aaKnown RBP9.72□□□□□ -0.85
SYN3-204ENST00000441821 SHOC2Q9UQ13 582 aa9.72□□□□□ -0.85
SYN3-204ENST00000441821 DNMT3AQ9Y6K1 912 aaPredicted RBP9.72□□□□□ -0.85
SYN3-204ENST00000441821 PIKFYVEQ9Y2I7 2098 aa9.71□□□□□ -0.85
SYN3-204ENST00000441821 A0A1W2PQJ5 194 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 SLC9B1P1A6NJY1 282 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 E7EQ34 232 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 DDX3YO15523 660 aaKnown RBP9.71□□□□□ -0.86
SYN3-204ENST00000441821 LDB2O43679 373 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 GZMAP12544 262 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 CDH3P22223 829 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 PREPP48147 710 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 XRCC4Q13426 336 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 IQCB1Q15051 598 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 ATP13A5Q4VNC0 1218 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 METRNLQ641Q3 311 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 NCBP2-AS2Q69YL0 99 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 IGFL2Q6UWQ7 119 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 FAM83HQ6ZRV2 1179 aaPredicted RBP9.71□□□□□ -0.86
SYN3-204ENST00000441821 FAM71BQ8TC56 605 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 TTC25Q96NG3 672 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 TRAPPC9Q96Q05 1148 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 TRIB3Q96RU7 358 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 GPR63Q9BZJ6 419 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 KIR3DX1Q9H7L2 352 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 CHST11Q9NPF2 352 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 ATP13A2Q9NQ11 1180 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 IMP3Q9NV31 184 aaKnown RBP9.71□□□□□ -0.86
SYN3-204ENST00000441821 SLC24A2Q9UI40 661 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 ITGB1BP2Q9UKP3 347 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 POMT2Q9UKY4 750 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 ZNF711Q9Y462 761 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 CSAG2Q9Y5P2 127 aa9.71□□□□□ -0.86
SYN3-204ENST00000441821 CFAP20Q9Y6A4 193 aaKnown RBP9.71□□□□□ -0.86
SYN3-204ENST00000441821 DIDO1Q9BTC0 2240 aaKnown RBP9.71□□□□□ -0.86
SYN3-204ENST00000441821 MATN2O00339 956 aa9.7□□□□□ -0.86
SYN3-204ENST00000441821 MAP3K7O43318 606 aa9.7□□□□□ -0.86
SYN3-204ENST00000441821 ZNF749O43361 778 aa9.7□□□□□ -0.86
SYN3-204ENST00000441821 SLC4A1P02730 911 aa9.7□□□□□ -0.86
SYN3-204ENST00000441821 PIRTP0C851 137 aa9.7□□□□□ -0.86
SYN3-204ENST00000441821 POLR2CP19387 275 aaPredicted RBP9.7□□□□□ -0.86
SYN3-204ENST00000441821 MX2P20592 715 aa9.7□□□□□ -0.86
SYN3-204ENST00000441821 FOLR3P41439 243 aa9.7□□□□□ -0.86
SYN3-204ENST00000441821 ARCN1P48444 511 aaKnown RBP9.7□□□□□ -0.86
SYN3-204ENST00000441821 UBASH3AP57075 661 aa9.7□□□□□ -0.86
SYN3-204ENST00000441821 SLC25A11Q02978 314 aaKnown RBP9.7□□□□□ -0.86
SYN3-204ENST00000441821 CDC16Q13042 620 aa9.7□□□□□ -0.86
SYN3-204ENST00000441821 PRKAA1Q13131 559 aa9.7□□□□□ -0.86
SYN3-204ENST00000441821 AIMP2Q13155 320 aaKnown RBP9.7□□□□□ -0.86
SYN3-204ENST00000441821 MMRN1Q13201 1228 aa9.7□□□□□ -0.86
SYN3-204ENST00000441821 PIGHQ14442 188 aaPredicted RBP9.7□□□□□ -0.86
SYN3-204ENST00000441821 NFE2L1Q14494 772 aa9.7□□□□□ -0.86
SYN3-204ENST00000441821 KRT81Q14533 505 aa9.7□□□□□ -0.86
SYN3-204ENST00000441821 TESK1Q15569 626 aa9.7□□□□□ -0.86
SYN3-204ENST00000441821 HIF1AQ16665 826 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms