RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 LMLNQ96KR4 655 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 LURAP1Q96LR2 239 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 CCDC114Q96M63 670 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 RPRD1AQ96P16 312 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 TM9SF2Q99805 663 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 OMDQ99983 421 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 PARD6BQ9BYG5 372 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 KRTAP3-1Q9BYR8 98 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 SLC2A11Q9BYW1 496 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 FRMD8P1Q9BZ68 369 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 ZYG11BQ9C0D3 744 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 RSPH9Q9H1X1 276 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 NEUROG2Q9H2A3 272 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 CATSPERBQ9H7T0 1116 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 UCKL1Q9NWZ5 548 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 GFOD1Q9NXC2 390 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 PLK2Q9NYY3 685 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 GRHL1Q9NZI5 618 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 TNFRSF10DQ9UBN6 386 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 PISDQ9UG56 409 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 ERRFI1Q9UJM3 462 aaPredicted RBP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 RAB21Q9UL25 225 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 DRG1Q9Y295 367 aaKnown RBP4.77□□□□□ -1.65
PTPN4-206ENST00000441089 TP53TG5Q9Y2B4 290 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 MYRFQ9Y2G1 1151 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 HEY1Q9Y5J3 304 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 ACTL7AQ9Y615 435 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 U3KQA8 63 aa4.77□□□□□ -1.65
PTPN4-206ENST00000441089 A0A0D9SEW6 157 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 PRAMEF33A0A0G2JMD5 474 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 FADS2P1A8MWK0 482 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 HACD1B0YJ81 288 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 C10orf142B7Z368 130 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 RASA4BC9J798 803 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 PRAMEF26H0Y7S4 382 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 J3KR12 359 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 DFFAO00273 331 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 MCF2LO15068 1137 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 MATN3O15232 486 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 SHOXO15266 292 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 RASA4O43374 803 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 MAFKO60675 156 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 PRAMEF10O60809 474 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 RNASEH2AO75792 299 aaKnown RBP4.76□□□□□ -1.65
PTPN4-206ENST00000441089 LUC7L3O95232 432 aaKnown RBP4.76□□□□□ -1.65
PTPN4-206ENST00000441089 METTL18O95568 372 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 CD160O95971 181 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 RECKO95980 971 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 KRT14P02533 472 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 CYBBP04839 570 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 GSNP06396 782 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 CD1EP15812 388 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 PNLIPP16233 465 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 PTPN3P26045 913 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 HOXD9P28356 352 aaPredicted RBP4.76□□□□□ -1.65
PTPN4-206ENST00000441089 CCKBRP32239 447 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 GARSP41250 739 aaKnown RBP4.76□□□□□ -1.65
PTPN4-206ENST00000441089 RPL21P46778 160 aaKnown RBP4.76□□□□□ -1.65
PTPN4-206ENST00000441089 LIMS1P48059 325 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 NR2C2P49116 596 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 MAPKAPK2P49137 400 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 CARSP49589 748 aaKnown RBP4.76□□□□□ -1.65
PTPN4-206ENST00000441089 VPS41P49754 854 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 PAPOLAP51003 745 aaKnown RBP4.76□□□□□ -1.65
PTPN4-206ENST00000441089 PDX1P52945 283 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 TERF1P54274 439 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 SLURP1P55000 103 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 CDH4P55283 916 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 GUCY2DQ02846 1103 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 PPIDQ08752 370 aaKnown RBP4.76□□□□□ -1.65
PTPN4-206ENST00000441089 WASHC5Q12768 1159 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 MTA1Q13330 715 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 DHX34Q14147 1143 aaKnown RBP4.76□□□□□ -1.65
PTPN4-206ENST00000441089 GLE1Q53GS7 698 aaKnown RBP4.76□□□□□ -1.65
PTPN4-206ENST00000441089 SETMARQ53H47 684 aaPredicted RBP4.76□□□□□ -1.65
PTPN4-206ENST00000441089 RABGAP1LQ5R372 815 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 ACBD5Q5T8D3 534 aaPredicted RBP4.76□□□□□ -1.65
PTPN4-206ENST00000441089 GUSBP11Q6P575 273 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 DARS2Q6PI48 645 aaKnown RBP4.76□□□□□ -1.65
PTPN4-206ENST00000441089 LRRC31Q6UY01 552 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 ASB18Q6ZVZ8 466 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 CHST9Q7L1S5 443 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 CDKL3Q8IVW4 592 aaPredicted RBP4.76□□□□□ -1.65
PTPN4-206ENST00000441089 CCDC13Q8IYE1 715 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 CNTD1Q8N815 330 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 FAM71DQ8N9W8 422 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 OR7D4Q8NG98 312 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 SPATA3Q8NHX4 192 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 CCDC110Q8TBZ0 833 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 WFIKKN2Q8TEU8 576 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 PDCD6IPQ8WUM4 868 aaKnown RBP4.76□□□□□ -1.65
PTPN4-206ENST00000441089 MAML1Q92585 1016 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 ARHGEF2Q92974 986 aaKnown RBP4.76□□□□□ -1.65
PTPN4-206ENST00000441089 TMA16Q96EY4 203 aaKnown RBP4.76□□□□□ -1.65
PTPN4-206ENST00000441089 ALG14Q96F25 216 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 HMCESQ96FZ2 354 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 RUNDC3BQ96NL0 473 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 FERD3LQ96RJ6 166 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 GORASP1Q9BQQ3 440 aa4.76□□□□□ -1.65
PTPN4-206ENST00000441089 ERP44Q9BS26 406 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms