RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 IRF9Q00978 393 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 PFKPQ01813 784 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 OCRLQ01968 901 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 DLX2Q07687 328 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 GRSF1Q12849 480 aaKnown RBP eCLIP3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 IFT88Q13099 833 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 SMAD4Q13485 552 aaKnown RBP3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 PWP1Q13610 501 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 ENPP2Q13822 863 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 RCN2Q14257 317 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 CSHL1Q14406 222 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 SEMA3AQ14563 771 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 STARD3Q14849 445 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 PCLAFQ15004 111 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 ACOX1Q15067 660 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 CHRNA6Q15825 494 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 AAK1Q2M2I8 961 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 ZNF284Q2VY69 593 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 TTLL9Q3SXZ7 439 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 TMEM52BQ4KMG9 183 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 CFAP157Q5JU67 520 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 SPDYAQ5MJ70 313 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 LDLRAP1Q5SW96 308 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 RBM20Q5T481 1227 aaKnown RBP3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 LIPMQ5VYY2 423 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 C6orf89Q6UWU4 347 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 FAM151BQ6UXP7 276 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 MACC1Q6ZN28 852 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 CCDC121Q6ZUS5 278 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 ERN2Q76MJ5 926 aaKnown RBP3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 PIWIL4Q7Z3Z4 852 aaKnown RBP3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 LDB1Q86U70 411 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 TSPAN33Q86UF1 283 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 ZSWIM9Q86XI8 627 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 WDR75Q8IWA0 830 aaKnown RBP3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 ARMC10Q8N2F6 343 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 FSTL5Q8N475 847 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 AFAP1L2Q8N4X5 818 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 GPR26Q8NDV2 337 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 ACVR1CQ8NER5 493 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 OR6Y1Q8NGX8 325 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 STAG3L4Q8TBR4 150 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 PIP4K2CQ8TBX8 421 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 VOPP1Q96AW1 172 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 NXNL1Q96CM4 212 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 EID2BQ96D98 161 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 DCUN1D1Q96GG9 259 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 PLPPR2Q96GM1 343 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 FAR2Q96K12 515 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 BIRC8Q96P09 236 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 ASB2Q96Q27 587 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 VPS35Q96QK1 796 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 SMIM14Q96QK8 99 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 PANX3Q96QZ0 392 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 GPR21Q99679 349 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 OLFM1Q99784 485 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 TRMOQ9BU70 441 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 TUBB6Q9BUF5 446 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 SPATA16Q9BXB7 569 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 DRC3Q9H069 523 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 ILKAPQ9H0C8 392 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 WWP1Q9H0M0 922 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 RSPH9Q9H1X1 276 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 TTYH1Q9H313 450 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 RABEP2Q9H5N1 569 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 STN1Q9H668 368 aaKnown RBP3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 PRSS16Q9NQE7 514 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 PFDN4Q9NQP4 134 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 SPATS2LQ9NUQ6 558 aaKnown RBP3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 GTSE1Q9NYZ3 720 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 NCKIPSDQ9NZQ3 722 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 CPSF2Q9P2I0 782 aaKnown RBP3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 XPR1Q9UBH6 696 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 CDH22Q9UJ99 828 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 SCML1Q9UN30 329 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 APOBEC2Q9Y235 224 aaKnown RBP3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 FAM50BQ9Y247 325 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 DHRS7Q9Y394 339 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 USH1CQ9Y6N9 552 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 STON1Q9Y6Q2 735 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 NUMBLQ9Y6R0 609 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 LRRK1Q38SD2 2015 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 TRPM6Q9BX84 2022 aa3.92□□□□□ -1.78
HMGB1P37-201ENST00000439613 TRIOO75962 3097 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 IGLV3-16A0A075B6K0 115 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 TRPC5OSA6NMA1 111 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 SPECC1L-ADORA2AF8WAN1 911 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 K7EQS6 105 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 GAPDHSO14556 408 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 AREL1O15033 823 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 OR1I1O60431 355 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 DLX3O60479 287 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 CCDC22O60826 627 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 KERAO60938 352 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 DNAJC6O75061 913 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 NIPSNAP2O75323 286 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 ATP5HO75947 161 aa3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 IPO13O94829 963 aaKnown RBP3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 TOP3BO95985 862 aaKnown RBP3.91□□□□□ -1.78
HMGB1P37-201ENST00000439613 FTH1P02794 183 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms