RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ZFP37Q9Y6Q3 630 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 PTPRFP10586 1907 aa9.81□□□□□ -0.84
CDC42SE1-202ENST00000439374 PAPPA2Q9BXP8 1791 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 HAS3O00219 553 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 MUSKO15146 869 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 FKBP9O95302 570 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 BMP10O95393 424 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 B3GALT4O96024 378 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 RHOCP08134 193 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 THRBP10828 461 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 SLC6A2P23975 617 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 RPS3AP61247 264 aaKnown RBP9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 PCBP1Q15365 356 aaKnown RBP eCLIP9.8□□□□□ -0.844e-8■■■□□ 14.6
CDC42SE1-202ENST00000439374 POM121L1PQ3SYA9 428 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 BRMS1LQ5PSV4 323 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 ATXN7L2Q5T6C5 722 aaPredicted RBP9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 NIPAL1Q6NVV3 410 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 FKBP9P1Q75LS8 142 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 DET1Q7L5Y6 550 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 IFNL1Q8IU54 200 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 SIDT2Q8NBJ9 832 aaKnown RBP9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 OR4L1Q8NH43 312 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 SCUBE2Q9NQ36 999 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 STARD7Q9NQZ5 370 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 TLR8Q9NR97 1041 aaKnown RBP9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 GALPQ9UBC7 116 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 SLCO3A1Q9UIG8 710 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 VPS28Q9UK41 221 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 ZNF487B1APH4 448 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 ASNA1O43681 348 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 GUCY1B2O75343 617 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 GJB5O95377 273 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 CYBBP04839 570 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 WEE1P30291 646 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 SCAPQ12770 1279 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 KCNAB2Q13303 367 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 ZNF177Q13360 481 aaPredicted RBP9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 CCNYL2Q5T2Q4 361 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 TMTC4Q5T4D3 741 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 RANBP10Q6VN20 620 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 Q6ZPB1 254 aaPredicted RBP9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 VASH1Q7L8A9 365 aaPredicted RBP9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 SERINC5Q86VE9 423 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 ADGRG5Q8IZF4 528 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 CACTIN-AS1Q8N1I8 211 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 CLDN19Q8N6F1 224 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 ZNF540Q8NDQ6 660 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 FAM83FQ8NEG4 500 aaPredicted RBP9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 PTERQ96BW5 349 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 BIRC8Q96P09 236 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 ALPK1Q96QP1 1244 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 HGH1Q9BTY7 390 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 NANOGQ9H9S0 305 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 FKBPLQ9UIM3 349 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 MEN1O00255 615 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 DLGAP1O14490 977 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 AZIN1O14977 448 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 SSX4O60224 188 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 CLASP2O75122 1294 aaKnown RBP9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 CCNKO75909 580 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 ATP5BP06576 529 aaKnown RBP9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 ARCN1P48444 511 aaKnown RBP9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 HCAR3P49019 387 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 CYP27C1Q4G0S4 372 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 PTRHD1Q6GMV3 140 aaKnown RBP9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 TRAF7Q6Q0C0 670 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 MCFD2Q8NI22 146 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 UBASH3BQ8TF42 649 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 STARD8Q92502 1023 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 CEP295NLQ96MC4 621 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 KCNS3Q9BQ31 491 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 BDH2Q9BUT1 245 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 TRIM62Q9BVG3 475 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 SEZ6LQ9BYH1 1024 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 PRKD2Q9BZL6 878 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 FBXO44Q9H4M3 255 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 RUBCNLQ9H714 662 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 ADPRHL2Q9NX46 363 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 TRMT6Q9UJA5 497 aaKnown RBP9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 PDE10AQ9Y233 779 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 UGT2A1Q9Y4X1 527 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 SDK1Q7Z5N4 2213 aa9.8□□□□□ -0.84
CDC42SE1-202ENST00000439374 CDH23Q9H251 3354 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 A0A087X1B8 175 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 MANSC4A6NHS7 340 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 SLCO1B7G3V0H7 640 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 G3V2T6 193 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 PRRG1O14668 218 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 H2AFYO75367 372 aaKnown RBP9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 C1RP00736 705 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 LCKP06239 509 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 MYCLP1P12525 358 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 IDH2P48735 452 aaKnown RBP9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 AIF1P55008 147 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 ACAP2Q15057 778 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 RAB41Q5JT25 222 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 IL27RAQ6UWB1 636 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 CYS1Q717R9 158 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 BHLHA9Q7RTU4 235 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms