RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 WDR59Q6PJI9 974 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 FAM180AQ6UWF9 173 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 FAM198BQ6UWH4 519 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 WASH2PQ6VEQ5 465 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 SPOCD1Q6ZMY3 1216 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 MRGPREQ86SM8 312 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 LRRC8AQ8IWT6 810 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 ARHGAP12Q8IWW6 846 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 BBS5Q8N3I7 341 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 CCDC120Q96HB5 630 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 SYT11Q9BT88 431 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 MCCC2Q9HCC0 563 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 OLAHQ9NV23 265 aa10.88□□□□□ -0.67
CSTF3-203ENST00000438862 NOCTQ9UK39 431 aaKnown RBP10.88□□□□□ -0.67
CSTF3-203ENST00000438862 A0A0J9YYE9 177 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 A0A0U1RQS6 177 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 EIF3CLB5ME19 914 aaKnown RBP10.87□□□□□ -0.67
CSTF3-203ENST00000438862 C9J4A7 227 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 KMOO15229 486 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 DAPK3O43293 454 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 ZBTB11O95625 1053 aaPredicted RBP10.87□□□□□ -0.67
CSTF3-203ENST00000438862 TRBC1P01850 177 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 MMEP08473 750 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 GZMAP12544 262 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 DRD2P14416 443 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 ZNF8P17098 575 aaPredicted RBP10.87□□□□□ -0.67
CSTF3-203ENST00000438862 AGAP20933 346 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 AGXTP21549 392 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 IDSP22304 550 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 PPP1CAP62136 330 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 ZNF169Q14929 603 aaPredicted RBP10.87□□□□□ -0.67
CSTF3-203ENST00000438862 INSCQ1MX18 579 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 DNTTIP2Q5QJE6 756 aaKnown RBP10.87□□□□□ -0.67
CSTF3-203ENST00000438862 E4F1Q66K89 784 aaPredicted RBP10.87□□□□□ -0.67
CSTF3-203ENST00000438862 RPUSD3Q6P087 351 aaKnown RBP10.87□□□□□ -0.67
CSTF3-203ENST00000438862 IGFL2Q6UWQ7 119 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 CERS6Q6ZMG9 384 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 ARHGAP36Q6ZRI8 547 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 NOP9Q86U38 636 aaKnown RBP10.87□□□□□ -0.67
CSTF3-203ENST00000438862 SYTL1Q8IYJ3 562 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 CARFQ8N187 725 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 BCORP1Q8N888 145 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 CHTF18Q8WVB6 975 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 CCDC42Q96M95 316 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 EIF3CQ99613 913 aaKnown RBP10.87□□□□□ -0.67
CSTF3-203ENST00000438862 BAG1Q99933 345 aaPredicted RBP10.87□□□□□ -0.67
CSTF3-203ENST00000438862 AGPAT1Q99943 283 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 C17orf62Q9BQA9 187 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 MGME1Q9BQP7 344 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 HAUS4Q9H6D7 363 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 FANCEQ9HB96 536 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 SYTL2Q9HCH5 934 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 TRIM39Q9HCM9 518 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 PCMTD2Q9NV79 361 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 ATXN10Q9UBB4 475 aa10.87□□□□□ -0.67
CSTF3-203ENST00000438862 SEC16AO15027 2179 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 RGSL1A5PLK6 1076 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 FADS2P1A8MWK0 482 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 EEF2KO00418 725 aaKnown RBP10.86□□□□□ -0.67
CSTF3-203ENST00000438862 CCL21O00585 134 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 CHUKO15111 745 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 VEGFDO43915 354 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 KLF7O75840 302 aaPredicted RBP10.86□□□□□ -0.67
CSTF3-203ENST00000438862 LCA5LO95447 670 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 CYP1A1P04798 512 aaPredicted RBP10.86□□□□□ -0.67
CSTF3-203ENST00000438862 PTMAP06454 111 aaKnown RBP10.86□□□□□ -0.67
CSTF3-203ENST00000438862 PDHA1P08559 390 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 HBQ1P09105 142 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 BMP2P12643 396 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 BRAFP15056 766 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 ZNF7P17097 686 aaPredicted RBP10.86□□□□□ -0.67
CSTF3-203ENST00000438862 CYLC1P35663 651 aaPredicted RBP10.86□□□□□ -0.67
CSTF3-203ENST00000438862 ZNF143P52747 638 aaPredicted RBP10.86□□□□□ -0.67
CSTF3-203ENST00000438862 GSCP56915 257 aaPredicted RBP10.86□□□□□ -0.67
CSTF3-203ENST00000438862 TLR1Q15399 786 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 SEPT7Q16181 437 aaKnown RBP10.86□□□□□ -0.67
CSTF3-203ENST00000438862 HIF1AQ16665 826 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.86□□□□□ -0.67
CSTF3-203ENST00000438862 ASTE1Q2TB18 679 aaPredicted RBP10.86□□□□□ -0.67
CSTF3-203ENST00000438862 TDRD12Q587J7 1177 aaKnown RBP10.86□□□□□ -0.67
CSTF3-203ENST00000438862 HENMT1Q5T8I9 393 aaKnown RBP10.86□□□□□ -0.67
CSTF3-203ENST00000438862 ZNF571Q7Z3V5 609 aaPredicted RBP10.86□□□□□ -0.67
CSTF3-203ENST00000438862 SLC30A5Q8TAD4 765 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 WDR24Q96S15 920 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 TIMM29Q9BSF4 260 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 SELENOOQ9BVL4 669 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 OR2AG1Q9H205 316 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 FAM83DQ9H4H8 585 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 ACTR5Q9H9F9 607 aaPredicted RBP10.86□□□□□ -0.67
CSTF3-203ENST00000438862 P4HTMQ9NXG6 502 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 SLC23A2Q9UGH3 650 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 BTRCQ9Y297 605 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 CSAG2Q9Y5P2 127 aa10.86□□□□□ -0.67
CSTF3-203ENST00000438862 TRGV8A0A0C4DH27 118 aa10.85□□□□□ -0.67
CSTF3-203ENST00000438862 ANKRD62A6NC57 917 aa10.85□□□□□ -0.67
CSTF3-203ENST00000438862 SIGLEC16A6NMB1 481 aa10.85□□□□□ -0.67
CSTF3-203ENST00000438862 OR52A4PA6NMU1 304 aa10.85□□□□□ -0.67
CSTF3-203ENST00000438862 PCDH17O14917 1159 aa10.85□□□□□ -0.67
CSTF3-203ENST00000438862 CCP110O43303 1012 aa10.85□□□□□ -0.67
CSTF3-203ENST00000438862 LDB2O43679 373 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms