RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 RENBPP51606 427 aa11.94□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 IL10RBQ08334 325 aa11.94□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 AIMP2Q13155 320 aaKnown RBP11.94□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 RFTN1Q14699 578 aaPredicted RBP11.94□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 CYP2A13Q16696 494 aa11.94□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 ARMC12Q5T9G4 340 aa11.94□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 NAA35Q5VZE5 725 aa11.94□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 ISM2Q6H9L7 571 aa11.94□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 TTI2Q6NXR4 508 aa11.94□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 B4GALNT4Q76KP1 1039 aa11.94□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 RBM12BQ8IXT5 1001 aaKnown RBP11.94□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 NPWQ8N729 165 aa11.94□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 NDC1Q9BTX1 674 aa11.94□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 DHRS4Q9BTZ2 278 aa11.94□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 SLC6A20Q9NP91 592 aa11.94□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 SEC14L3Q9UDX4 400 aa11.94□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 CFAP45Q9UL16 551 aa11.94□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 ATRQ13535 2644 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 OR5K3A6NET4 321 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 SLC9B1P1A6NJY1 282 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 AGPSO00116 658 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 ZNF749O43361 778 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 MTA2O94776 668 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 KLHL18O94889 574 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 KPNA2P52292 529 aaKnown RBP11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 TPI1P60174 286 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 NOMO3P69849 1222 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 CBLBQ13191 982 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 SLC9A5Q14940 896 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 CEBPEQ15744 281 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 TMTC4Q5T4D3 741 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 HENMT1Q5T8I9 393 aaKnown RBP11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 C1orf189Q5VU69 101 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 PRAMEF13Q5VWM6 474 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 ADGRG6Q86SQ4 1221 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 ZNF547Q8IVP9 402 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 FAM71AQ8IYT1 594 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 FAM81BQ96LP2 452 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 CD180Q99467 661 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 EPS8L2Q9H6S3 715 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 SIX2Q9NPC8 291 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 GPATCH2LQ9NWQ4 482 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 RMND1Q9NWS8 449 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 HRASLS2Q9NWW9 162 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 FBXL4Q9UKA2 621 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 DNAJC12Q9UKB3 198 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 PCM1Q15154 2024 aa11.93□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 A0A0J9YYE9 177 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 CHUKO15111 745 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 SLC19A2O60779 497 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 PEX11BO96011 259 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 TRBC1P01850 177 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 ZNF30P17039 623 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 AGXTP21549 392 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 PON1P27169 355 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 RFC1P35251 1148 aaPredicted RBP11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 PKP1Q13835 747 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 IHHQ14623 411 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 AGAP9Q5VTM2 703 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 ATL3Q6DD88 541 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 KLHL10Q6JEL2 608 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 ALKBH2Q6NS38 261 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 TMEM200AQ86VY9 491 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 OR2Y1Q8NGV0 311 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 ARSGQ96EG1 525 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 CITED4Q96RK1 184 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 SLC7A5P2Q9GIP4 190 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 LIME1Q9H400 295 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 FAM83DQ9H4H8 585 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 PLA2G3Q9NZ20 509 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 CDYLQ9Y232 598 aa11.92□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 CCDC66A2RUB6 948 aa11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 PSMA7O14818 248 aa11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 CCP110O43303 1012 aa11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 MTX2O75431 263 aa11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 MMEP08473 750 aa11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 IDSP22304 550 aa11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 ADAM8P78325 824 aa11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 CA9Q16790 459 aa11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 KLHL35Q6PF15 583 aa11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 WDR59Q6PJI9 974 aa11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 WASH2PQ6VEQ5 465 aa11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 NOP9Q86U38 636 aaKnown RBP11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 BIVMQ86UB2 503 aa11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 LRRN4CLQ8ND94 238 aa11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 PTERQ96BW5 349 aa11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 DHTKD1Q96HY7 919 aaPredicted RBP11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 DPH2Q9BQC3 489 aaPredicted RBP11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 MGME1Q9BQP7 344 aa11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 C11orf70Q9BRQ4 267 aa11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 FANCEQ9HB96 536 aa11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 TRIM39Q9HCM9 518 aa11.91□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 OR6C74A6NCV1 312 aa11.9□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 KMOO15229 486 aa11.9□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 SLC25A14O95258 325 aaPredicted RBP11.9□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 LSM8O95777 96 aaKnown RBP11.9□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 GPD1P21695 349 aa11.9□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 PREPP48147 710 aa11.9□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 SPINT3P49223 89 aa11.9□□□□□ -0.5
SMAD9-IT1-201ENST00000437983 LMAN1P49257 510 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms