RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 CDAP32320 146 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 ARL3P36405 182 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 APOBEC1P41238 236 aaKnown RBP2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 ARF3P61204 181 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 RPS3AP61247 264 aaKnown RBP2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 OLR1P78380 273 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 ARF1P84077 181 aaKnown RBP2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 SETQ01105 290 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 GOLGA8DPQ0D2H9 430 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 RIGQ13278 110 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 MAMLD1Q13495 774 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 DCTN2Q13561 401 aaKnown RBP2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 ENPP2Q13822 863 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 KIR2DS5Q14953 304 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 SNAI3Q3KNW1 292 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 GTDC1Q4AE62 458 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 SPATA1Q5VX52 437 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 ALS2CLQ60I27 953 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 HAUS3Q68CZ6 603 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 ZNF774Q6NX45 483 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 PAPD4Q6PIY7 484 aaKnown RBP2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 PLXDC2Q6UX71 529 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 BRINP3Q76B58 766 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 GSTA5Q7RTV2 222 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 PXKQ7Z7A4 578 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 MRGPRDQ8TDS7 321 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 ZNRF4Q8WWF5 429 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 SMARCE1Q969G3 411 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 ACOX2Q99424 681 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 PIP5K1AQ99755 562 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 GLIS2Q9BZE0 524 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 APOBEC3GQ9HC16 384 aaKnown RBP2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 ASAH2Q9NR71 780 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 SLC38A7Q9NVC3 462 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 EHD2Q9NZN4 543 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 LIMA1Q9UHB6 759 aaKnown RBP2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 HAO1Q9UJM8 370 aa2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 FBXO2Q9UK22 296 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P31-201ENST00000437242 SUPT6HQ7KZ85 1726 aaKnown RBP2.84□□□□□ -1.96
HMGB1P31-201ENST00000437242 LRRIQ1Q96JM4 1722 aa2.84□□□□□ -1.96
HMGB1P31-201ENST00000437242 CARMIL1Q5VZK9 1371 aa2.84□□□□□ -1.96
HMGB1P31-201ENST00000437242 ZMYM4Q5VZL5 1548 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 ZNF142P52746 1687 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 A0A1W2PP11 408 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 ANKRD18BA2A2Z9 1011 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 C5orf60A6NFR6 353 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 PRR32B1ATL7 298 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 PLOD2O00469 737 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 TGFB1I1O43294 461 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 PAGE4O60829 102 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 DNAH10OSP0CZ25 163 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 UGT1A1P22309 533 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 RGS2P41220 211 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 PPARDQ03181 441 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 PRKG2Q13237 762 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 OLIG2Q13516 323 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 DRAP1Q14919 205 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 COL28A1Q2UY09 1125 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 DPCR1Q3MIW9 517 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 WDR78Q5VTH9 848 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 ARHGEF16Q5VV41 709 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 SNX30Q5VWJ9 437 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 NCEH1Q6PIU2 408 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 SARM1Q6SZW1 724 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 CLEC4GQ6UXB4 293 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 CDC20BQ86Y33 519 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 RPAP2Q8IXW5 612 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 CCDC13Q8IYE1 715 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 TMEM116Q8NCL8 245 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 INTS12Q96CB8 462 aaKnown RBP2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 HARBI1Q96MB7 349 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 CHCHD6Q9BRQ6 235 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 PLCXD1Q9NUJ7 323 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 PRR34Q9NV39 138 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 KLHL9Q9P2J3 617 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 INTS6Q9UL03 887 aaKnown RBP2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 LYVE1Q9Y5Y7 322 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 KCNE2Q9Y6J6 123 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 PIAS3Q9Y6X2 628 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 XIRP1Q702N8 1843 aaKnown RBP2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 FLT1P17948 1338 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 DIP2CQ9Y2E4 1556 aa2.83□□□□□ -1.96
HMGB1P31-201ENST00000437242 KIF14Q15058 1648 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 CAMSAP1Q5T5Y3 1602 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 MYO3AQ8NEV4 1616 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 RAPGEF6Q8TEU7 1601 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 IGLV7-46A0A075B6I9 117 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 LIPT2A6NK58 231 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 EIF3CLB5ME19 914 aaKnown RBP2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 M0QZ24 198 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 SLC22A2O15244 555 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 SYNCRIPO60506 623 aaKnown RBP2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 RNASEH2AO75792 299 aaKnown RBP2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 IPO7O95373 1038 aaKnown RBP2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 EIF2S1P05198 315 aaKnown RBP2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 TFAP2AP05549 437 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 KRT19P08727 400 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 SPARCP09486 303 aa2.82□□□□□ -1.96
HMGB1P31-201ENST00000437242 LIFP15018 202 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms