RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 GAB3Q8WWW8 586 aa22.58■■□□□ 1.21
CPSF4-204ENST00000436336 PTERQ96BW5 349 aa22.58■■□□□ 1.21
CPSF4-204ENST00000436336 ALG9Q9H6U8 611 aa22.58■■□□□ 1.21
CPSF4-204ENST00000436336 COG4Q9H9E3 785 aa22.58■■□□□ 1.21
CPSF4-204ENST00000436336 MRPL40Q9NQ50 206 aaKnown RBP22.58■■□□□ 1.21
CPSF4-204ENST00000436336 MOSPD1Q9UJG1 213 aa22.58■■□□□ 1.21
CPSF4-204ENST00000436336 ZDBF2Q9HCK1 2354 aa22.58■■□□□ 1.2
CPSF4-204ENST00000436336 TARM1B6A8C7 271 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 TK2O00142 265 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 BTN3A1O00481 513 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 THEGLP0DJG4 465 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 AVPR2P30518 371 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 SERPINB4P48594 390 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 RACK1P63244 317 aaKnown RBP22.57■■□□□ 1.2
CPSF4-204ENST00000436336 IL9RQ01113 521 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 PLA2G4EQ3MJ16 856 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 PYCR3Q53H96 274 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 CYHR1Q6ZMK1 362 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 LPCAT2Q7L5N7 544 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 DCP2Q8IU60 420 aaKnown RBP22.57■■□□□ 1.2
CPSF4-204ENST00000436336 CFAP206Q8IYR0 622 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 STAG3L4Q8TBR4 150 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 DNASE2BQ8WZ79 361 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 KLHDC7BQ96G42 594 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 TIMM29Q9BSF4 260 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 CPSF2Q9P2I0 782 aaKnown RBP22.57■■□□□ 1.2
CPSF4-204ENST00000436336 COPG2Q9UBF2 871 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 FAM8A1Q9UBU6 413 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 KCNJ13O60928 360 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 SBK3P0C264 359 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 GUCY1A3Q02108 690 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 WDR45BQ5MNZ6 344 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 IQCHQ86VS3 1027 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 VRK3Q8IV63 474 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 SLC22A18ASQ8N1D0 253 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 MFSD2AQ8NA29 543 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 CYP4F12Q9HCS2 524 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 KLQ9UEF7 1012 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 IKZF3Q9UKT9 509 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 SLCO1B1Q9Y6L6 691 aa22.57■■□□□ 1.2
CPSF4-204ENST00000436336 SPAG17Q6Q759 2223 aa22.56■■□□□ 1.2
CPSF4-204ENST00000436336 CDC7O00311 574 aa22.56■■□□□ 1.2
CPSF4-204ENST00000436336 CPA3P15088 417 aa22.56■■□□□ 1.2
CPSF4-204ENST00000436336 MAOBP27338 520 aa22.56■■□□□ 1.2
CPSF4-204ENST00000436336 CD38P28907 300 aa22.56■■□□□ 1.2
CPSF4-204ENST00000436336 OVGP1Q12889 678 aa22.56■■□□□ 1.2
CPSF4-204ENST00000436336 OR4D1Q15615 310 aa22.56■■□□□ 1.2
CPSF4-204ENST00000436336 TSNQ15631 228 aaKnown RBP22.56■■□□□ 1.2
CPSF4-204ENST00000436336 CHST15Q7LFX5 561 aaPredicted RBP22.56■■□□□ 1.2
CPSF4-204ENST00000436336 TAX1BP1Q86VP1 789 aa22.56■■□□□ 1.2
CPSF4-204ENST00000436336 SLC22A15Q8IZD6 547 aa22.56■■□□□ 1.2
CPSF4-204ENST00000436336 LILRA3Q8N6C8 439 aaPredicted RBP22.56■■□□□ 1.2
CPSF4-204ENST00000436336 OR1E3Q8WZA6 343 aa22.56■■□□□ 1.2
CPSF4-204ENST00000436336 CARS2Q9HA77 564 aaKnown RBP22.56■■□□□ 1.2
CPSF4-204ENST00000436336 SLC23A2Q9UGH3 650 aa22.56■■□□□ 1.2
CPSF4-204ENST00000436336 TSR3Q9UJK0 312 aaKnown RBP22.56■■□□□ 1.2
CPSF4-204ENST00000436336 NPEPPSL1A6NEC2 478 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 BIRC5O15392 142 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 KERAO60938 352 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 BPGMP07738 259 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 VCLP18206 1134 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 GNPDA1P46926 289 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 DMPKQ09013 629 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 RPA4Q13156 261 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 NFE2L1Q14494 772 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 PCLAFQ15004 111 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 ZNF528Q3MIS6 628 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 XKR5Q6UX68 686 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 ADAMTSL2Q86TH1 951 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 RGL4Q8IZJ4 473 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 NELL1Q92832 810 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 PDXPQ96GD0 296 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 ATOH8Q96SQ7 321 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 MIR1-1HGQ9H1L0 117 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 DPEP2Q9H4A9 486 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 TM7SF3Q9NS93 570 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 ADAM21Q9UKJ8 722 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 GPSM3Q9Y4H4 160 aa22.55■■□□□ 1.2
CPSF4-204ENST00000436336 SPTY2D1-AS1A0A0U1RR47 76 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 A0A1W2PR77 199 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 G3V2L1 256 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 MYL2P10916 166 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 PREPP48147 710 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 SRP54P61011 504 aaKnown RBP22.54■■□□□ 1.2
CPSF4-204ENST00000436336 ZYG11AQ6WRX3 759 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 C1orf216Q8TAB5 229 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 OR2M4Q96R27 311 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 TM9SF3Q9HD45 589 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 RNF112Q9ULX5 631 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 FANCMQ8IYD8 2048 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 H3BM21 787 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 ACP5P13686 325 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 TAC1P20366 129 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 KCNC1P48547 511 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 TUBB8Q3ZCM7 444 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 PMS2CLQ68D20 193 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 ARMCX6Q7L4S7 300 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 SKA2Q8WVK7 121 aaPredicted RBP22.54■■□□□ 1.2
CPSF4-204ENST00000436336 CKAP2Q8WWK9 683 aa22.54■■□□□ 1.2
CPSF4-204ENST00000436336 TSACCQ96A04 125 aaPredicted RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms