RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 KCND1Q9NSA2 647 aa15.9■□□□□ 0.14
SMPD4-207ENST00000435455 TREX1Q9NSU2 369 aa15.9■□□□□ 0.14
SMPD4-207ENST00000435455 CATSPERZQ9NTU4 200 aa15.9■□□□□ 0.14
SMPD4-207ENST00000435455 SYBUQ9NX95 663 aa15.9■□□□□ 0.14
SMPD4-207ENST00000435455 SAMD15Q9P1V8 674 aa15.9■□□□□ 0.14
SMPD4-207ENST00000435455 SOX13Q9UN79 622 aa15.9■□□□□ 0.14
SMPD4-207ENST00000435455 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.9■□□□□ 0.144e-7■□□□□ 10.9
SMPD4-207ENST00000435455 FAM208BQ5VWN6 2430 aa15.9■□□□□ 0.14
SMPD4-207ENST00000435455 MN1Q10571 1320 aaPredicted RBP15.9■□□□□ 0.14
SMPD4-207ENST00000435455 PTPRQQ9UMZ3 2332 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 IFRD1O00458 451 aaPredicted RBP15.89■□□□□ 0.13
SMPD4-207ENST00000435455 NVLO15381 856 aaKnown RBP15.89■□□□□ 0.13
SMPD4-207ENST00000435455 KRT37O76014 449 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 TYRP1P17643 537 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 MPSTP25325 297 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 SLC5A2P31639 672 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 ABCG1P45844 678 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 CAPZBP47756 277 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 CD151P48509 253 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 TTPAP49638 278 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 ZNF658BQ4V348 819 aaPredicted RBP15.89■□□□□ 0.13
SMPD4-207ENST00000435455 SNAP47Q5SQN1 464 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 ANKRD22Q5VYY1 191 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 CAPRIN2Q6IMN6 1127 aaKnown RBP15.89■□□□□ 0.13
SMPD4-207ENST00000435455 XKR5Q6UX68 686 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 ARHGAP22Q7Z5H3 698 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 CAND1Q86VP6 1230 aaKnown RBP15.89■□□□□ 0.13
SMPD4-207ENST00000435455 PPIL6Q8IXY8 311 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 MPP5Q8N3R9 675 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 LILRA3Q8N6C8 439 aaPredicted RBP15.89■□□□□ 0.13
SMPD4-207ENST00000435455 GPR150Q8NGU9 434 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 SLCO2A1Q92959 643 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 CAPZA3Q96KX2 299 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 RMDN2Q96LZ7 410 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 RUNDC3BQ96NL0 473 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 DPH1Q9BZG8 443 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 DDX47Q9H0S4 455 aaKnown RBP15.89■□□□□ 0.13
SMPD4-207ENST00000435455 OGFRQ9NZT2 677 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 RNF14Q9UBS8 474 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 EPHA6Q9UF33 1036 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 PCYOX1Q9UHG3 505 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 CFAP20Q9Y6A4 193 aaKnown RBP15.89■□□□□ 0.13
SMPD4-207ENST00000435455 COLEC10Q9Y6Z7 277 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 ADAMTS20P59510 1910 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 NBEAQ8NFP9 2946 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 ZFYVE26Q68DK2 2539 aa15.89■□□□□ 0.13
SMPD4-207ENST00000435455 CFAP47Q6ZTR5 3102 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 PRAMEF33A0A0G2JMD5 474 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 MAGEB16A2A368 324 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 AGRPO00253 132 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 LIN7AO14910 233 aaPredicted RBP15.88■□□□□ 0.13
SMPD4-207ENST00000435455 CD3EAPO15446 510 aaKnown RBP15.88■□□□□ 0.13
SMPD4-207ENST00000435455 TMEM63AO94886 807 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 C9P02748 559 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 ITIH1P19827 911 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 NMBRP28336 390 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 ETV5P41161 510 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 PAFAH1B1P43034 410 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 MAPK10P53779 464 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 PLOD1Q02809 727 aaPredicted RBP15.88■□□□□ 0.13
SMPD4-207ENST00000435455 KRT33BQ14525 404 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 PLCL1Q15111 1095 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 KCTD19Q17RG1 926 aaPredicted RBP15.88■□□□□ 0.13
SMPD4-207ENST00000435455 TMEM164Q5U3C3 297 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 CASC4Q6P4E1 433 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 CREG2Q8IUH2 290 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 SPDYE1Q8NFV5 336 aaPredicted RBP15.88■□□□□ 0.13
SMPD4-207ENST00000435455 HNRNPLLQ8WVV9 542 aaKnown RBP15.88■□□□□ 0.13
SMPD4-207ENST00000435455 KCNE4Q8WWG9 221 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 ZDHHC12Q96GR4 267 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 TSSK1BQ9BXA7 367 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 RAB33BQ9H082 229 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 OR52A5Q9H2C5 316 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 KIR3DX1Q9H7L2 352 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 ASIC3Q9UHC3 531 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 ACSL6Q9UKU0 697 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 PRSS21Q9Y6M0 314 aa15.88■□□□□ 0.13
SMPD4-207ENST00000435455 SDR42E2A6NKP2 422 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 A8MU76 341 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 B4E171 279 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 TOX3O15405 576 aaPredicted RBP15.87■□□□□ 0.13
SMPD4-207ENST00000435455 CAPN5O15484 640 aaPredicted RBP15.87■□□□□ 0.13
SMPD4-207ENST00000435455 OR1I1O60431 355 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 AVILO75366 819 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 VAPBO95292 243 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 ANKRD34CP0C6C1 535 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 CCL4P13236 92 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 PAMP19021 973 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 TSPAN7P41732 249 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 GFERP55789 205 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 PTK6Q13882 451 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 SEMA3AQ14563 771 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 KIAA0930Q6ICG6 404 aaPredicted RBP15.87■□□□□ 0.13
SMPD4-207ENST00000435455 MRNIPQ6NTE8 343 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 SYDE1Q6ZW31 735 aaPredicted RBP15.87■□□□□ 0.13
SMPD4-207ENST00000435455 NAT8LQ8N9F0 302 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 ELMO1Q92556 727 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 RSC1A1Q92681 617 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 USP7Q93009 1102 aa15.87■□□□□ 0.13
SMPD4-207ENST00000435455 MFSD3Q96ES6 412 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms