RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 DGKEP52429 567 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 PLA2G16P53816 162 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 EEFSECP57772 596 aaKnown RBP13.56□□□□□ -0.24
SGMS1-203ENST00000429490 GTDC1Q4AE62 458 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 PM20D1Q6GTS8 502 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 TMEM151AQ8N4L1 468 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 OR52J3Q8NH60 311 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 ZNF420Q8TAQ5 688 aaPredicted RBP13.56□□□□□ -0.24
SGMS1-203ENST00000429490 NPLOC4Q8TAT6 608 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 DACT3Q96B18 629 aaPredicted RBP13.56□□□□□ -0.24
SGMS1-203ENST00000429490 MAELQ96JY0 434 aaKnown RBP13.56□□□□□ -0.24
SGMS1-203ENST00000429490 APOL4Q9BPW4 351 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 RBM4BQ9BQ04 359 aaKnown RBP13.56□□□□□ -0.24
SGMS1-203ENST00000429490 RBM4Q9BWF3 364 aaKnown RBP13.56□□□□□ -0.24
SGMS1-203ENST00000429490 TFB2MQ9H5Q4 396 aaKnown RBP13.56□□□□□ -0.24
SGMS1-203ENST00000429490 NSUN3Q9H649 340 aaKnown RBP13.56□□□□□ -0.24
SGMS1-203ENST00000429490 SDR39U1Q9NRG7 319 aaPredicted RBP13.56□□□□□ -0.24
SGMS1-203ENST00000429490 TREX1Q9NSU2 369 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 PDP1Q9P0J1 537 aaPredicted RBP13.56□□□□□ -0.24
SGMS1-203ENST00000429490 PADI3Q9ULW8 664 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 HSD17B1P14061 328 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 PPP3CCP48454 512 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 NKX2-5P52952 324 aaPredicted RBP13.56□□□□□ -0.24
SGMS1-203ENST00000429490 SLC13A2Q13183 592 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 PTPRRQ15256 657 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 CYBRD1Q53TN4 286 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 ANKRD34AQ69YU3 496 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 ANKRD26P1Q6NSI1 321 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 MSANTD2Q6P1R3 559 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 TMC5Q6UXY8 1006 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 IGFN1Q86VF2 1251 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 LRRC49Q8IUZ0 686 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 SETD9Q8NE22 299 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 ABHD11Q8NFV4 315 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 TBC1D15Q8TC07 691 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 IMP4Q96G21 291 aaKnown RBP13.56□□□□□ -0.24
SGMS1-203ENST00000429490 APOLD1Q96LR9 279 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 CIPCQ9C0C6 399 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 CEP44Q9C0F1 390 aa13.56□□□□□ -0.24
SGMS1-203ENST00000429490 TARM1B6A8C7 271 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 RFXANKO14593 260 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 GABRDO14764 452 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 OTCP00480 354 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 KRT6AP02538 564 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 KRT6BP04259 564 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 ITGB1P05556 798 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 KRT6CP48668 564 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 PGFP49763 221 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 STC1P52823 247 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 NPTX1Q15818 432 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 C6orf141Q5SZD1 244 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 TMEM132CQ8N3T6 1108 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 OR4F6Q8NGB9 312 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 HMGCLL1Q8TB92 370 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 IGSF8Q969P0 613 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 NT5C3BQ969T7 300 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 ACDQ96AP0 544 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 PPP3R2Q96LZ3 170 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 RMND5AQ9H871 391 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 REEP1Q9H902 201 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 GIN1Q9NXP7 522 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 AGO1Q9UL18 857 aaKnown RBP13.55□□□□□ -0.24
SGMS1-203ENST00000429490 PCDHGA8Q9Y5G5 932 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 GPC6Q9Y625 555 aaPredicted RBP13.55□□□□□ -0.24
SGMS1-203ENST00000429490 MYO10Q9HD67 2058 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 SNPHO15079 494 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 MITFO75030 526 aaPredicted RBP13.55□□□□□ -0.24
SGMS1-203ENST00000429490 CYP7B1O75881 506 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 FUCA1P04066 466 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 KCNQ1P51787 676 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 SELPLGQ14242 412 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 PIK3R6Q5UE93 754 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 MAMDC4Q6UXC1 1216 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 STON2Q8WXE9 905 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 IRGQQ8WZA9 623 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 PYCR2Q96C36 320 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 PANX1Q96RD7 426 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 KRT84Q9NSB2 600 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 RAI2Q9Y5P3 530 aa13.55□□□□□ -0.24
SGMS1-203ENST00000429490 LOC100130705A0A1B0GUX0 176 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 ZNF99A8MXY4 864 aaPredicted RBP13.54□□□□□ -0.24
SGMS1-203ENST00000429490 TFECO14948 347 aaPredicted RBP13.54□□□□□ -0.24
SGMS1-203ENST00000429490 MYO1DO94832 1006 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 MBL2P11226 248 aaPredicted RBP13.54□□□□□ -0.24
SGMS1-203ENST00000429490 ZNF7P17097 686 aaPredicted RBP13.54□□□□□ -0.24
SGMS1-203ENST00000429490 PBX3P40426 434 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 EMP3P54852 163 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 YBX1P67809 324 aaKnown RBP13.54□□□□□ -0.24
SGMS1-203ENST00000429490 GTF2H2Q13888 395 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 AAK1Q2M2I8 961 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 COLEC12Q5KU26 742 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 GPR153Q6NV75 609 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 GTF2H2CQ6P1K8 395 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 SLC22A16Q86VW1 577 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 ZDHHC21Q8IVQ6 265 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 KIAA1191Q96A73 305 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 BTN2A3PQ96KV6 586 aa13.54□□□□□ -0.24
SGMS1-203ENST00000429490 TSEN34Q9BSV6 310 aaKnown RBP13.54□□□□□ -0.24
SGMS1-203ENST00000429490 FAM126AQ9BYI3 521 aaPredicted RBP13.54□□□□□ -0.24
SGMS1-203ENST00000429490 SLC2A11Q9BYW1 496 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms