RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 STK32CQ86UX6 486 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 RNF130Q86XS8 419 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 SPPL2CQ8IUH8 684 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 CCDC36Q8IYA8 594 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 OR8H3Q8N146 312 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZSCAN1Q8NBB4 408 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 CLRN3Q8NCR9 226 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 C19orf18Q8NEA5 215 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 SRFBP1Q8NEF9 429 aaKnown RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 OR5K1Q8NHB7 308 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ITFG1Q8TB96 612 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 BPIFB1Q8TDL5 484 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 NSUN6Q8TEA1 469 aaKnown RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 UTP15Q8TED0 518 aaKnown RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 FBLIM1Q8WUP2 373 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 DCAF4Q8WV16 495 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZFPM2Q8WW38 1151 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ASB15Q8WXK1 588 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 RBPMSQ93062 196 aaKnown RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 RNF34Q969K3 372 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 C18orf25Q96B23 403 aaPredicted RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ELMO3Q96BJ8 720 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 TBC1D20Q96BZ9 403 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 C19orf60Q96EN9 201 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 TSPAN17Q96FV3 270 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 CERS2Q96G23 380 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 MFSD14AQ96MC6 490 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 GAD1Q99259 594 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 APBA2Q99767 749 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 WDR83Q9BRX9 315 aaKnown RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZNF670Q9BS34 389 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 LXNQ9BS40 222 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 GATA5Q9BWX5 397 aaPredicted RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 LRRC3Q9BY71 257 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 TOR3AQ9H497 397 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 RNPEPQ9H4A4 650 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 DUSP21Q9H596 190 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 TASP1Q9H6P5 420 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 WDR55Q9H6Y2 383 aaPredicted RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 SP110Q9HB58 689 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 NTN4Q9HB63 628 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 POLMQ9NP87 494 aaPredicted RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ASAH2Q9NR71 780 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 IGSF5Q9NSI5 407 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 HPF1Q9NWY4 346 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 GTSE1Q9NYZ3 720 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 NDRG3Q9UGV2 375 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 SRP68Q9UHB9 627 aaKnown RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 NARFQ9UHQ1 456 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ADGRE2Q9UHX3 823 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 LEF1Q9UJU2 399 aaPredicted RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ELF5Q9UKW6 265 aaPredicted RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 TMPRSS11EQ9UL52 423 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ABCG2Q9UNQ0 655 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 AP4E1Q9UPM8 1137 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZFR2Q9UPR6 939 aaKnown RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 USP22Q9UPT9 525 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 CNTN6Q9UQ52 1028 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 U3KQ87 197 aa5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 BAZ2AQ9UIF9 1905 aaKnown RBP5.54□□□□□ -1.52
VTI1BP4-201ENST00000427516 CYP2D7A0A087X1C5 515 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 SLC35F4A4IF30 521 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 C3orf70A6NLC5 250 aaPredicted RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 FIGNL2A6NMB9 653 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 CXorf49A8MYA2 514 aaPredicted RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 G3V2L1 256 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 KCNK1O00180 336 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 SDHDO14521 159 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 PRMT5O14744 637 aaPredicted RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 MYL12BO14950 172 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 GSTA4O15217 222 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 GRID2O43424 1007 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 CHMP2AO43633 222 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 SLC43A1O75387 559 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 LRCH4O75427 683 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 ERN1O75460 977 aaKnown RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 TNFRSF21O75509 655 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 ITGA10O75578 1167 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 PPM1BO75688 479 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 RASGRP1O95267 797 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 PAPSS2O95340 614 aaPredicted RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 VNN1O95497 513 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 ITGB1P05556 798 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 CDK1P06493 297 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 PROS1P07225 676 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 ANXA6P08133 673 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 SERPINF2P08697 491 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 RBP1P09455 135 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 OR56A5P0C7T3 313 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 PEPDP12955 493 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 VEGFAP15692 232 aaPredicted RBP5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 IL1RNP18510 177 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 MYL12AP19105 171 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 DDCP20711 480 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 MPSTP25325 297 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 ACVR2AP27037 513 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 LTKP29376 864 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 CD6P30203 668 aa5.53□□□□□ -1.52
VTI1BP4-201ENST00000427516 CDH5P33151 784 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms