RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 OR2T11Q8NH01 316 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 CD200R1Q8TD46 325 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 KCTD14Q9BQ13 255 aaPredicted RBP10.53□□□□□ -0.72
CUX1-205ENST00000425244 LRRC3Q9BY71 257 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 ABCD2Q9UBJ2 740 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 PCDHB9Q9Y5E1 797 aa10.53□□□□□ -0.72
CUX1-205ENST00000425244 TRAV19A0A0A6YYK7 116 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 ILVBLA1L0T0 632 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 CCDC154A6NI56 674 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 SYNCRIPO60506 623 aaKnown RBP10.52□□□□□ -0.73
CUX1-205ENST00000425244 KATNA1O75449 491 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 SLC22A3O75751 556 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 SEC24DO94855 1032 aaPredicted RBP10.52□□□□□ -0.73
CUX1-205ENST00000425244 MATN4O95460 622 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 MLYCDO95822 493 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 TSPAN12O95859 305 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 C1RP00736 705 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 UROSP10746 265 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 PTPN2P17706 415 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 CDH15P55291 814 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 PLIN5Q00G26 463 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 LIPEQ05469 1076 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 APOFQ13790 326 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 ATXN7L2Q5T6C5 722 aaPredicted RBP10.52□□□□□ -0.73
CUX1-205ENST00000425244 CARM1Q86X55 608 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 BBS7Q8IWZ6 715 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 OR56A4Q8NGH8 313 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.52□□□□□ -0.736e-7■■■■■ 53.4
CUX1-205ENST00000425244 PLD4Q96BZ4 506 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 RMND5BQ96G75 393 aaPredicted RBP10.52□□□□□ -0.73
CUX1-205ENST00000425244 UHRF1Q96T88 793 aaPredicted RBP10.52□□□□□ -0.73
CUX1-205ENST00000425244 CCM2LQ9NUG4 571 aaPredicted RBP10.52□□□□□ -0.73
CUX1-205ENST00000425244 AIG1Q9NVV5 245 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 VPS9D1Q9Y2B5 631 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 FCF1Q9Y324 198 aaKnown RBP10.52□□□□□ -0.73
CUX1-205ENST00000425244 ARIH1Q9Y4X5 557 aaPredicted RBP10.52□□□□□ -0.73
CUX1-205ENST00000425244 MTCL1Q9Y4B5 1905 aaKnown RBP10.52□□□□□ -0.73
CUX1-205ENST00000425244 TRIOBPQ9H2D6 2365 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 MYOFQ9NZM1 2061 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 A0A1B0GVM2 712 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 A0A1W2PP18 115 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 GSK3BP49841 420 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 NR1H2P55055 460 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 ARF5P84085 180 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 BNIP2Q12982 314 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 ANKFN1Q8N957 763 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 ADAMTS19Q8TE59 1207 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 DDI1Q8WTU0 396 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 GPR63Q9BZJ6 419 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 TM6SF2Q9BZW4 377 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 EPB41L1Q9H4G0 881 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 ALG2Q9H553 416 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 ARMC1Q9NVT9 282 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 HACD3Q9P035 362 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 MAFFQ9ULX9 164 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 USP22Q9UPT9 525 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 MYRFQ9Y2G1 1151 aa10.52□□□□□ -0.73
CUX1-205ENST00000425244 OBSL1O75147 1896 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 ASPDHA6ND91 283 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 AQP12BA6NM10 295 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 H0Y626 953 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 H3BSA7 217 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 STX16O14662 325 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 TBL1XO60907 577 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 H6PDO95479 791 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 GUCA1CO95843 209 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 GNAO1P09471 354 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 ALPIP09923 528 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 BMP2P12643 396 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 HSD17B1P14061 328 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 NAT1P18440 290 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 FASP25445 335 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 MZF1P28698 734 aaPredicted RBP10.51□□□□□ -0.73
CUX1-205ENST00000425244 POLR2JP52435 117 aaKnown RBP10.51□□□□□ -0.73
CUX1-205ENST00000425244 RHOAP61586 193 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 TXNL4AP83876 142 aaKnown RBP10.51□□□□□ -0.73
CUX1-205ENST00000425244 PLA2G4EQ3MJ16 856 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 C5orf22Q49AR2 442 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 ATP6AP1LQ52LC2 224 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 TXNDC11Q6PKC3 985 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 FAM151BQ6UXP7 276 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 B3GNT6Q6ZMB0 384 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 SPATA19Q7Z5L4 167 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 AQP12AQ8IXF9 295 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 NUDT8Q8WV74 236 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 ZUFSPQ96AP4 578 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 TMEM125Q96AQ2 219 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 DUS3LQ96G46 650 aaKnown RBP10.51□□□□□ -0.73
CUX1-205ENST00000425244 ZSWIM3Q96MP5 696 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 SEPHS2Q99611 448 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 GDF15Q99988 308 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 HAUS8Q9BT25 410 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 INTS7Q9NVH2 962 aaKnown RBP10.51□□□□□ -0.73
CUX1-205ENST00000425244 ACTR3BQ9P1U1 418 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 ZNF510Q9Y2H8 683 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 GOLGA8CPA6NN73 597 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 HNRNPRO43390 633 aaKnown RBP10.51□□□□□ -0.73
CUX1-205ENST00000425244 XYLBO75191 536 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 PRAMEF12O95522 483 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 BMP1P13497 986 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms