RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 MGME1Q9BQP7 344 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 CST11Q9H112 138 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 M0QX08 132 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 GSTT2BP0CG30 244 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 EFNA1P20827 205 aaPredicted RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 TUBA1BP68363 451 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 TXNL4AP83876 142 aaKnown RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 SRSF11Q05519 484 aaKnown RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 TUBA1AQ71U36 451 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 SPAG16Q8N0X2 631 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 C2orf73Q8N5S3 287 aaPredicted RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 LRRC3Q9BY71 257 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 MRPL17Q9NRX2 175 aaKnown RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 MIOSQ9NXC5 875 aa12.2□□□□□ -0.46
CLCN4-203ENST00000421085 NOCTQ9UK39 431 aaKnown RBP12.2□□□□□ -0.46
CLCN4-203ENST00000421085 GLYATL1P3A0A0U1RQE8 302 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 ARPC2O15144 300 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 C8BP07358 591 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 FECHP22830 423 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 PTX3P26022 381 aaPredicted RBP12.19□□□□□ -0.46
CLCN4-203ENST00000421085 SLC15A1P46059 708 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 GRIK5Q16478 980 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 PABPC1LQ4VXU2 614 aaKnown RBP12.19□□□□□ -0.46
CLCN4-203ENST00000421085 FAM91A1Q658Y4 838 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 PDHXO00330 501 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 DSC2Q02487 901 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 RPL6Q02878 288 aaKnown RBP12.19□□□□□ -0.46
CLCN4-203ENST00000421085 C9orf57Q5W0N0 161 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 TOP6BLQ8N6T0 577 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 NAT16Q8N8M0 369 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 GALNT6Q8NCL4 622 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 OR10H4Q8NGA5 316 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 PIGXQ8TBF5 258 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 FATE1Q969F0 183 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 CXorf40BQ96DE9 158 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 ZNF358Q9NW07 568 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 SLC17A6Q9P2U8 582 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 CLPXO76031 633 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 HDCP19113 662 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 CD247P20963 164 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 CLK3P49761 638 aaKnown RBP12.19□□□□□ -0.46
CLCN4-203ENST00000421085 BEX3Q00994 111 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 ATCAYQ86WG3 371 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 SLC43A3Q8NBI5 491 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 ESAMQ96AP7 390 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 FRMD6Q96NE9 622 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 KCNC2Q96PR1 638 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 ITPAQ9BY32 194 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 ATG10Q9H0Y0 220 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 ARHGEF4Q9NR80 690 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 HPF1Q9NWY4 346 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 SPIN1Q9Y657 262 aaPredicted RBP12.19□□□□□ -0.46
CLCN4-203ENST00000421085 MAU2Q9Y6X3 613 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 PXDNQ92626 1479 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 TMEM63AO94886 807 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 GOT2P00505 430 aaKnown RBP12.19□□□□□ -0.46
CLCN4-203ENST00000421085 PRH1P02810 166 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 SLC6A4P31645 630 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 GRM5P41594 1212 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 RPIAP49247 311 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 RGS8P57771 180 aaPredicted RBP12.19□□□□□ -0.46
CLCN4-203ENST00000421085 PDE12Q6L8Q7 609 aaKnown RBP12.19□□□□□ -0.46
CLCN4-203ENST00000421085 PEX5LQ8IYB4 626 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 SPERTQ8NA61 448 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 TMBIM1Q969X1 311 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 EXOSC8Q96B26 276 aaKnown RBP12.19□□□□□ -0.46
CLCN4-203ENST00000421085 C8orf48Q96LL4 319 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 OR52B2Q96RD2 323 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 MRPL9Q9BYD2 267 aaKnown RBP12.19□□□□□ -0.46
CLCN4-203ENST00000421085 SOHLH2Q9NX45 425 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 STOX2Q9P2F5 926 aaPredicted RBP12.19□□□□□ -0.46
CLCN4-203ENST00000421085 NCKAP1Q9Y2A7 1128 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 FKBP7Q9Y680 259 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 TNS2Q63HR2 1409 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 FAM234BA2RU67 622 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 MT-CYBP00156 380 aaPredicted RBP12.19□□□□□ -0.46
CLCN4-203ENST00000421085 CCNCP24863 283 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 RHBDL3P58872 404 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 LARS2Q15031 903 aaKnown RBP12.19□□□□□ -0.46
CLCN4-203ENST00000421085 KLHL22Q53GT1 634 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 RBM20Q5T481 1227 aaKnown RBP12.19□□□□□ -0.46
CLCN4-203ENST00000421085 DCAF12L1Q5VU92 463 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 SMARCD3Q6STE5 483 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 ZNF563Q8TA94 476 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 TMEM27Q9HBJ8 222 aa12.19□□□□□ -0.46
CLCN4-203ENST00000421085 NRCAMQ92823 1304 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 OR2AT4A6NND4 320 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 SLC35G4P0C7Q5 338 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 CXCL9Q07325 125 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 TUBA3CQ13748 450 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 C17orf64Q86WR6 236 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 SIDT2Q8NBJ9 832 aaKnown RBP12.18□□□□□ -0.46
CLCN4-203ENST00000421085 LRRC58Q96CX6 371 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 FAM198AQ9UFP1 575 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 TCAF2A6NFQ2 919 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 ZSCAN5BA6NJL1 495 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 TEX46H3BTG2 121 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 ENTPD1P49961 510 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 CACNG1Q06432 222 aa12.18□□□□□ -0.46
CLCN4-203ENST00000421085 UBAP2Q5T6F2 1119 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms