RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 FOXM1Q08050 763 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 ABHD18Q0P651 414 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 MAP7Q14244 749 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 OASLQ15646 514 aaKnown RBP10.78□□□□□ -0.68
SSBP3-206ENST00000420121 CACHD1Q5VU97 1274 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 IRGCQ6NXR0 463 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 CERS6Q6ZMG9 384 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 ARHGEF18Q6ZSZ5 1173 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 PIANPQ8IYJ0 282 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 UBL4BQ8N7F7 174 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 ZSCAN1Q8NBB4 408 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 C12orf66Q96MD2 445 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 PPP1R2P1Q96PQ5 205 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 OR6C1Q96RD1 312 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 NRTNQ99748 197 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 LRRC40Q9H9A6 602 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 IMP3Q9NV31 184 aaKnown RBP10.78□□□□□ -0.68
SSBP3-206ENST00000420121 NLE1Q9NVX2 485 aaPredicted RBP10.78□□□□□ -0.68
SSBP3-206ENST00000420121 PIH1D1Q9NWS0 290 aaKnown RBP10.78□□□□□ -0.68
SSBP3-206ENST00000420121 SLC24A2Q9UI40 661 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 ACSL5Q9ULC5 683 aa10.78□□□□□ -0.68
SSBP3-206ENST00000420121 KLHL33A6NCF5 533 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 GOLGA6L9A6NEM1 432 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 OR5K3A6NET4 321 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 MROH6A6NGR9 719 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 ZNF189O75820 626 aaPredicted RBP10.77□□□□□ -0.69
SSBP3-206ENST00000420121 RASSF9O75901 435 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 ZIC2O95409 532 aaPredicted RBP10.77□□□□□ -0.69
SSBP3-206ENST00000420121 ATP1B2P14415 290 aaPredicted RBP10.77□□□□□ -0.69
SSBP3-206ENST00000420121 FOLR1P15328 257 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 ITGALP20701 1170 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 ACRV1P26436 265 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 OAS2P29728 719 aaKnown RBP10.77□□□□□ -0.69
SSBP3-206ENST00000420121 HADHAP40939 763 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 IL11RAQ14626 422 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 POU6F1Q14863 301 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 GPR33Q49SQ1 333 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 SERPINA9Q86WD7 417 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 TAB3Q8N5C8 712 aaPredicted RBP10.77□□□□□ -0.69
SSBP3-206ENST00000420121 RNF10Q8N5U6 811 aaKnown RBP10.77□□□□□ -0.69
SSBP3-206ENST00000420121 HM13Q8TCT9 377 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 ULK4Q96C45 1275 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 ZDHHC12Q96GR4 267 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 CDKN2AIPNLQ96HQ2 116 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 PPM1MQ96MI6 270 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 COPS8Q99627 209 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 MAP3K3Q99759 626 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 OR52A5Q9H2C5 316 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 KIR3DX1Q9H7L2 352 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 GPN2Q9H9Y4 310 aaPredicted RBP10.77□□□□□ -0.69
SSBP3-206ENST00000420121 ZDHHC3Q9NYG2 299 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 FAM8A1Q9UBU6 413 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 CRLS1Q9UJA2 301 aa10.77□□□□□ -0.69
SSBP3-206ENST00000420121 MRPS18BQ9Y676 258 aaKnown RBP10.77□□□□□ -0.69
SSBP3-206ENST00000420121 SPENQ96T58 3664 aaKnown RBP10.77□□□□□ -0.69
SSBP3-206ENST00000420121 FLNBO75369 2602 aaKnown RBP10.77□□□□□ -0.69
SSBP3-206ENST00000420121 C17orf113A0A1B0GUU1 675 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 TLCD2A6NGC4 264 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 ZNF891A8MT65 544 aaPredicted RBP10.76□□□□□ -0.69
SSBP3-206ENST00000420121 LIASO43766 372 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 SPAG6O75602 509 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 KIAA0754O94854 1291 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 POLBP06746 335 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 PDHA2P29803 388 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 KPNA2P52292 529 aaKnown RBP10.76□□□□□ -0.69
SSBP3-206ENST00000420121 NFKB2Q00653 900 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 CDC20Q12834 499 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 NFATC3Q12968 1075 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 KCNAB1Q14722 419 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 SIX1Q15475 284 aaPredicted RBP10.76□□□□□ -0.69
SSBP3-206ENST00000420121 DBN1Q16643 649 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 P3H1Q32P28 736 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.76□□□□□ -0.69
SSBP3-206ENST00000420121 ATP1A1-AS1Q5TC04 95 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 PRUNE1Q86TP1 453 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 CFAP206Q8IYR0 622 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 ESX1Q8N693 406 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 CLDN19Q8N6F1 224 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 GLIS1Q8NBF1 620 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 GALNT6Q8NCL4 622 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 STYXQ8WUJ0 223 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 ZFPM2Q8WW38 1151 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 STARD8Q92502 1023 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 UBXN4Q92575 508 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 ELMO2Q96JJ3 720 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 ULBP3Q9BZM4 244 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 TRIT1Q9H3H1 467 aaKnown RBP10.76□□□□□ -0.69
SSBP3-206ENST00000420121 COG4Q9H9E3 785 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 AKIRIN1Q9H9L7 192 aaPredicted RBP10.76□□□□□ -0.69
SSBP3-206ENST00000420121 HRASLS2Q9NWW9 162 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 GEMIN8Q9NWZ8 242 aaKnown RBP10.76□□□□□ -0.69
SSBP3-206ENST00000420121 PRSS21Q9Y6M0 314 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 RPS6KL1Q9Y6S9 549 aa10.76□□□□□ -0.69
SSBP3-206ENST00000420121 FLNCQ14315 2725 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 SEC16AO15027 2179 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 MED13Q9UHV7 2174 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 CCDC78A2IDD5 438 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 OR6C74A6NCV1 312 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 OR51F1A6NGY5 319 aa10.75□□□□□ -0.69
SSBP3-206ENST00000420121 PYCARD-AS1I3L0S3 204 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms