RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 GPR34Q9UPC5 381 aa20.41■□□□□ 0.86
CASC3-203ENST00000418132 TMEM202A6NGA9 273 aa20.4■□□□□ 0.86
CASC3-203ENST00000418132 SLCO2B1O94956 709 aa20.4■□□□□ 0.86
CASC3-203ENST00000418132 IGLV3-19P01714 112 aa20.4■□□□□ 0.86
CASC3-203ENST00000418132 ZNF8P17098 575 aaPredicted RBP20.4■□□□□ 0.86
CASC3-203ENST00000418132 CCR10P46092 362 aa20.4■□□□□ 0.86
CASC3-203ENST00000418132 ZNF658BQ4V348 819 aaPredicted RBP20.4■□□□□ 0.86
CASC3-203ENST00000418132 FRMD7Q6ZUT3 714 aa20.4■□□□□ 0.86
CASC3-203ENST00000418132 NEK10Q6ZWH5 1172 aa20.4■□□□□ 0.86
CASC3-203ENST00000418132 RAB44Q7Z6P3 723 aaPredicted RBP20.4■□□□□ 0.86
CASC3-203ENST00000418132 VRK3Q8IV63 474 aa20.4■□□□□ 0.86
CASC3-203ENST00000418132 LINC00615Q96LM1 132 aaPredicted RBP20.4■□□□□ 0.86
CASC3-203ENST00000418132 RMDN2Q96LZ7 410 aa20.4■□□□□ 0.86
CASC3-203ENST00000418132 LGR4Q9BXB1 951 aa20.4■□□□□ 0.86
CASC3-203ENST00000418132 BTBD1Q9H0C5 482 aa20.4■□□□□ 0.86
CASC3-203ENST00000418132 GSTO2Q9H4Y5 243 aa20.4■□□□□ 0.86
CASC3-203ENST00000418132 NUDT4Q9NZJ9 180 aa20.4■□□□□ 0.86
CASC3-203ENST00000418132 MARCOQ9UEW3 520 aaPredicted RBP20.4■□□□□ 0.86
CASC3-203ENST00000418132 DCTN4Q9UJW0 460 aa20.4■□□□□ 0.86
CASC3-203ENST00000418132 RAP2CQ9Y3L5 183 aa20.4■□□□□ 0.86
CASC3-203ENST00000418132 OARD1Q9Y530 152 aa20.4■□□□□ 0.86
CASC3-203ENST00000418132 FAM170BA6NMN3 283 aa20.39■□□□□ 0.86
CASC3-203ENST00000418132 H0YHG0 523 aa20.39■□□□□ 0.86
CASC3-203ENST00000418132 STX16-NPEPL1H3BU86 382 aa20.39■□□□□ 0.86
CASC3-203ENST00000418132 STX16O14662 325 aa20.39■□□□□ 0.86
CASC3-203ENST00000418132 RAD51BO15315 384 aa20.39■□□□□ 0.86
CASC3-203ENST00000418132 ALDH18A1P54886 795 aaKnown RBP20.39■□□□□ 0.86
CASC3-203ENST00000418132 UNC50Q53HI1 259 aa20.39■□□□□ 0.86
CASC3-203ENST00000418132 TRIM69Q86WT6 500 aa20.39■□□□□ 0.86
CASC3-203ENST00000418132 ZNF547Q8IVP9 402 aa20.39■□□□□ 0.86
CASC3-203ENST00000418132 SIX5Q8N196 739 aa20.39■□□□□ 0.86
CASC3-203ENST00000418132 ZNF781Q8N8C0 355 aa20.39■□□□□ 0.86
CASC3-203ENST00000418132 OR2T34Q8NGX1 318 aa20.39■□□□□ 0.86
CASC3-203ENST00000418132 DLG3Q92796 817 aa20.39■□□□□ 0.86
CASC3-203ENST00000418132 TRMOQ9BU70 441 aa20.39■□□□□ 0.86
CASC3-203ENST00000418132 FOXQ1Q9C009 403 aa20.39■□□□□ 0.86
CASC3-203ENST00000418132 ILKAPQ9H0C8 392 aaPredicted RBP20.39■□□□□ 0.86
CASC3-203ENST00000418132 WDR26Q9H7D7 661 aa20.39■□□□□ 0.86
CASC3-203ENST00000418132 RDH14Q9HBH5 336 aa20.39■□□□□ 0.86
CASC3-203ENST00000418132 GULP1Q9UBP9 304 aa20.39■□□□□ 0.86
CASC3-203ENST00000418132 SLC12A4Q9UP95 1085 aa20.39■□□□□ 0.86
CASC3-203ENST00000418132 SLC5A10A0PJK1 596 aa20.39■□□□□ 0.85
CASC3-203ENST00000418132 CHUKO15111 745 aa20.39■□□□□ 0.85
CASC3-203ENST00000418132 GSTM1P09488 218 aa20.39■□□□□ 0.85
CASC3-203ENST00000418132 KITP10721 976 aa20.39■□□□□ 0.85
CASC3-203ENST00000418132 MAT2AP31153 395 aaKnown RBP20.39■□□□□ 0.85
CASC3-203ENST00000418132 GSTM4Q03013 218 aa20.39■□□□□ 0.85
CASC3-203ENST00000418132 GALNT1Q10472 559 aaPredicted RBP20.39■□□□□ 0.85
CASC3-203ENST00000418132 FRA10AC1Q70Z53 315 aa20.39■□□□□ 0.85
CASC3-203ENST00000418132 TRAPPC5Q8IUR0 188 aa20.39■□□□□ 0.85
CASC3-203ENST00000418132 WDR75Q8IWA0 830 aaKnown RBP20.39■□□□□ 0.85
CASC3-203ENST00000418132 UBALD2Q8IYN6 164 aa20.39■□□□□ 0.85
CASC3-203ENST00000418132 GLMNQ92990 594 aa20.39■□□□□ 0.85
CASC3-203ENST00000418132 SIKE1Q9BRV8 207 aa20.39■□□□□ 0.85
CASC3-203ENST00000418132 C1QTNF3Q9BXJ4 246 aa20.39■□□□□ 0.85
CASC3-203ENST00000418132 SGK2Q9HBY8 427 aa20.39■□□□□ 0.85
CASC3-203ENST00000418132 PNPOQ9NVS9 261 aa20.39■□□□□ 0.85
CASC3-203ENST00000418132 C2orf42Q9NWW7 574 aa20.39■□□□□ 0.85
CASC3-203ENST00000418132 CD274Q9NZQ7 290 aa20.39■□□□□ 0.85
CASC3-203ENST00000418132 TMEM98Q9Y2Y6 226 aa20.39■□□□□ 0.85
CASC3-203ENST00000418132 USH1CQ9Y6N9 552 aa20.39■□□□□ 0.85
CASC3-203ENST00000418132 LRRC72A6NJI9 287 aa20.38■□□□□ 0.85
CASC3-203ENST00000418132 C10orf142B7Z368 130 aa20.38■□□□□ 0.85
CASC3-203ENST00000418132 UBOX5O94941 541 aa20.38■□□□□ 0.85
CASC3-203ENST00000418132 SIX3O95343 332 aaPredicted RBP20.38■□□□□ 0.85
CASC3-203ENST00000418132 IGFALSP35858 605 aa20.38■□□□□ 0.85
CASC3-203ENST00000418132 PRKAA1Q13131 559 aa20.38■□□□□ 0.85
CASC3-203ENST00000418132 PGBD3Q8N328 593 aa20.38■□□□□ 0.85
CASC3-203ENST00000418132 FITM2Q8N6M3 262 aa20.38■□□□□ 0.85
CASC3-203ENST00000418132 PDPRQ8NCN5 879 aa20.38■□□□□ 0.85
CASC3-203ENST00000418132 ASB11Q8WXH4 323 aa20.38■□□□□ 0.85
CASC3-203ENST00000418132 PHPT1Q9NRX4 125 aaPredicted RBP20.38■□□□□ 0.85
CASC3-203ENST00000418132 KCNK4Q9NYG8 393 aa20.38■□□□□ 0.85
CASC3-203ENST00000418132 UTP6Q9NYH9 597 aaKnown RBP20.38■□□□□ 0.85
CASC3-203ENST00000418132 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.38■□□□□ 0.85
CASC3-203ENST00000418132 ANKRD12Q6UB98 2062 aa20.38■□□□□ 0.85
CASC3-203ENST00000418132 A0A0G2JND7 137 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 C17orf113A0A1B0GUU1 675 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 NCF1BA6NI72 391 aaPredicted RBP20.37■□□□□ 0.85
CASC3-203ENST00000418132 NCF1CA8MVU1 366 aaPredicted RBP20.37■□□□□ 0.85
CASC3-203ENST00000418132 FFAR2O15552 330 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 SNX2O60749 519 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 SUPT7LO94864 414 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 NCF1P14598 390 aaPredicted RBP20.37■□□□□ 0.85
CASC3-203ENST00000418132 SETDB1Q15047 1291 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 PHKG1Q16816 387 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 GALNTL6Q49A17 601 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 RASGRP3Q8IV61 690 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 TMEM159Q96B96 161 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 OR1A2Q9Y585 309 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 C8GP07360 202 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 RPS17P08708 135 aaKnown RBP20.37■□□□□ 0.85
CASC3-203ENST00000418132 ALOX15P16050 662 aaPredicted RBP20.37■□□□□ 0.85
CASC3-203ENST00000418132 MPSTP25325 297 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 ARFIP2P53365 341 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 SYTL3Q4VX76 610 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 TMEM31Q5JXX7 168 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 ANO7Q6IWH7 933 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 RPS27LQ71UM5 84 aaKnown RBP20.37■□□□□ 0.85
CASC3-203ENST00000418132 C11orf96Q7Z7L8 435 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms