RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 BPIP17213 487 aa17.65■□□□□ 0.42
VCP-202ENST00000417448 FASLGP48023 281 aa17.65■□□□□ 0.42
VCP-202ENST00000417448 LMAN1P49257 510 aa17.65■□□□□ 0.42
VCP-202ENST00000417448 ETF1P62495 437 aaKnown RBP17.65■□□□□ 0.42
VCP-202ENST00000417448 TMPRSS15P98073 1019 aa17.65■□□□□ 0.42
VCP-202ENST00000417448 MSLNQ13421 630 aaPredicted RBP17.65■□□□□ 0.42
VCP-202ENST00000417448 C1QL3Q5VWW1 255 aa17.65■□□□□ 0.42
VCP-202ENST00000417448 CCDC137Q6PK04 289 aaKnown RBP17.65■□□□□ 0.42
VCP-202ENST00000417448 WDR74Q6RFH5 385 aaPredicted RBP17.65■□□□□ 0.42
VCP-202ENST00000417448 GLT6D1Q7Z4J2 308 aa17.65■□□□□ 0.42
VCP-202ENST00000417448 KLHDC8BQ8IXV7 354 aa17.65■□□□□ 0.42
VCP-202ENST00000417448 OR52K1Q8NGK4 314 aa17.65■□□□□ 0.42
VCP-202ENST00000417448 SLC37A2Q8TED4 501 aa17.65■□□□□ 0.42
VCP-202ENST00000417448 C16orf45Q96MC5 204 aaPredicted RBP17.65■□□□□ 0.42
VCP-202ENST00000417448 PHF12Q96QT6 1004 aa17.65■□□□□ 0.42
VCP-202ENST00000417448 DDX47Q9H0S4 455 aaKnown RBP17.65■□□□□ 0.42
VCP-202ENST00000417448 FAM83DQ9H4H8 585 aa17.65■□□□□ 0.42
VCP-202ENST00000417448 HOMER3Q9NSC5 361 aa17.65■□□□□ 0.42
VCP-202ENST00000417448 PKD2L2Q9NZM6 624 aa17.65■□□□□ 0.42
VCP-202ENST00000417448 ERRFI1Q9UJM3 462 aaPredicted RBP17.65■□□□□ 0.42
VCP-202ENST00000417448 SETD2Q9BYW2 2564 aaPredicted RBP17.65■□□□□ 0.42
VCP-202ENST00000417448 TCRBV7S3A2A0A539 114 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 CDC14CA4D256 554 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 FADS2P1A8MWK0 482 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 E7EVH7 732 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 CES2O00748 559 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 POLR1CO15160 346 aaPredicted RBP17.64■□□□□ 0.41
VCP-202ENST00000417448 PHF2O75151 1096 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 AP2A1O95782 977 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 EML2O95834 649 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 CA5AP35218 305 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 FDFT1P37268 417 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 ACTR1BP42025 376 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 ACTR1AP61163 376 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 CDK3Q00526 305 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 CYP1B1Q16678 543 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 KLHL7Q8IXQ5 586 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 OR10G6Q8NH81 332 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 AHCYL2Q96HN2 611 aaKnown RBP17.64■□□□□ 0.41
VCP-202ENST00000417448 NAP1L3Q99457 506 aaPredicted RBP17.64■□□□□ 0.41
VCP-202ENST00000417448 SLC38A3Q99624 504 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 LRRC40Q9H9A6 602 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 PHPT1Q9NRX4 125 aaPredicted RBP17.64■□□□□ 0.41
VCP-202ENST00000417448 SIDT1Q9NXL6 827 aaKnown RBP17.64■□□□□ 0.41
VCP-202ENST00000417448 PAK5Q9P286 719 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 SLC17A4Q9Y2C5 497 aa17.64■□□□□ 0.41
VCP-202ENST00000417448 TRBV23OR9-2A0A075B6M9 112 aa17.63■□□□□ 0.41
VCP-202ENST00000417448 GPR39O43194 453 aa17.63■□□□□ 0.41
VCP-202ENST00000417448 ZNF189O75820 626 aaPredicted RBP17.63■□□□□ 0.41
VCP-202ENST00000417448 LDLRP01130 860 aa17.63■□□□□ 0.41
VCP-202ENST00000417448 PPM1FP49593 454 aaPredicted RBP17.63■□□□□ 0.41
VCP-202ENST00000417448 BASP1P80723 227 aaKnown RBP17.63■□□□□ 0.41
VCP-202ENST00000417448 MRPS25P82663 173 aaKnown RBP17.63■□□□□ 0.41
VCP-202ENST00000417448 GPS1Q13098 491 aa17.63■□□□□ 0.41
VCP-202ENST00000417448 POU6F1Q14863 301 aa17.63■□□□□ 0.41
VCP-202ENST00000417448 CCDC38Q502W7 563 aa17.63■□□□□ 0.41
VCP-202ENST00000417448 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.63■□□□□ 0.41
VCP-202ENST00000417448 APLFQ8IW19 511 aaPredicted RBP17.63■□□□□ 0.41
VCP-202ENST00000417448 SPATA16Q9BXB7 569 aa17.63■□□□□ 0.41
VCP-202ENST00000417448 ULBP3Q9BZM4 244 aa17.63■□□□□ 0.41
VCP-202ENST00000417448 KLHL3Q9UH77 587 aa17.63■□□□□ 0.41
VCP-202ENST00000417448 CNOT6Q9ULM6 557 aaKnown RBP17.63■□□□□ 0.41
VCP-202ENST00000417448 PSMD3O43242 534 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 UGT1A9O60656 530 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 APRTP07741 180 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 UGT1A6P19224 532 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 UGT1A1P22309 533 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 UGT1A4P22310 534 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 DPTQ07507 201 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 SEMA5AQ13591 1074 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 HENMT1Q5T8I9 393 aaKnown RBP17.62■□□□□ 0.41
VCP-202ENST00000417448 FAM151BQ6UXP7 276 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 PPP1R21Q6ZMI0 780 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 MARK2Q7KZI7 788 aaKnown RBP17.62■□□□□ 0.41
VCP-202ENST00000417448 ZNF765Q7L2R6 523 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 SFRP1Q8N474 314 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 GALNT6Q8NCL4 622 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 OR4K2Q8NGD2 314 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 OR13C4Q8NGS5 318 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 PRR7Q8TB68 274 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 NCSTNQ92542 709 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 TRIM44Q96DX7 344 aaPredicted RBP17.62■□□□□ 0.41
VCP-202ENST00000417448 UGT1A7Q9HAW7 530 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 UGT1A10Q9HAW8 530 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 UGT1A8Q9HAW9 530 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 IL17CQ9P0M4 197 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 TMPRSS11EQ9UL52 423 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 PDZD2O15018 2839 aa17.62■□□□□ 0.41
VCP-202ENST00000417448 KATNA1O75449 491 aa17.61■□□□□ 0.41
VCP-202ENST00000417448 IVLP07476 585 aa17.61■□□□□ 0.41
VCP-202ENST00000417448 CHRNA6Q15825 494 aa17.61■□□□□ 0.41
VCP-202ENST00000417448 ANKRD22Q5VYY1 191 aa17.61■□□□□ 0.41
VCP-202ENST00000417448 C6orf15Q6UXA7 325 aaPredicted RBP17.61■□□□□ 0.41
VCP-202ENST00000417448 DNAAF3Q8N9W5 541 aa17.61■□□□□ 0.41
VCP-202ENST00000417448 ZNF592Q92610 1267 aa17.61■□□□□ 0.41
VCP-202ENST00000417448 SCARF2Q96GP6 870 aaPredicted RBP17.61■□□□□ 0.41
VCP-202ENST00000417448 TWSG1Q9GZX9 223 aa17.61■□□□□ 0.41
VCP-202ENST00000417448 FAM96AQ9H5X1 160 aa17.61■□□□□ 0.41
VCP-202ENST00000417448 ARNT2Q9HBZ2 717 aa17.61■□□□□ 0.41
VCP-202ENST00000417448 IL26Q9NPH9 171 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms