RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 PHACTR1Q9C0D0 580 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 KCNF1Q9H3M0 494 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 FOXJ2Q9P0K8 574 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 KLHL3Q9UH77 587 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 FEZ2Q9UHY8 353 aaPredicted RBP9.42□□□□□ -0.9
LINC01090-201ENST00000415357 CRLS1Q9UJA2 301 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 PSMD13Q9UNM6 376 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 CFAP20Q9Y6A4 193 aaKnown RBP9.42□□□□□ -0.9
LINC01090-201ENST00000415357 SLC30A1Q9Y6M5 507 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 OR51F1A6NGY5 319 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 OR5K4A6NMS3 321 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 A8MU76 341 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 C9orf172C9J069 976 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 ZW10O43264 779 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 PRAMEF10O60809 474 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 TYRP1P17643 537 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 VCLP18206 1134 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 XRCC1P18887 633 aaPredicted RBP9.41□□□□□ -0.9
LINC01090-201ENST00000415357 ITGALP20701 1170 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 STIP1P31948 543 aaKnown RBP9.41□□□□□ -0.9
LINC01090-201ENST00000415357 RPL22P35268 128 aaKnown RBP9.41□□□□□ -0.9
LINC01090-201ENST00000415357 FDFT1P37268 417 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 HADHAP40939 763 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 LMAN1P49257 510 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 ARSDP51689 593 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 TERF1P54274 439 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 GFERP55789 205 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 PDE1BQ01064 536 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 SEMA5AQ13591 1074 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 CCNG2Q16589 344 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 LONRF2Q1L5Z9 754 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 ZRANB3Q5FWF4 1079 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 AGAP9Q5VTM2 703 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 DUS1LQ6P1R4 473 aaKnown RBP9.41□□□□□ -0.9
LINC01090-201ENST00000415357 TMEM71Q6P5X7 295 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 ABRAXAS1Q6UWZ7 409 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 XKR5Q6UX68 686 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 PPP1R21Q6ZMI0 780 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 TMEM26Q6ZUK4 368 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 SNX20Q7Z614 316 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 SERPINA9Q86WD7 417 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 PIANPQ8IYJ0 282 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 NXPE1Q8N323 547 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 LILRA3Q8N6C8 439 aaPredicted RBP9.41□□□□□ -0.9
LINC01090-201ENST00000415357 CCDC89Q8N998 374 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 DNAAF3Q8N9W5 541 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 USP7Q93009 1102 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 SH3KBP1Q96B97 665 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 CXorf40BQ96DE9 158 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 NLE1Q9NVX2 485 aaPredicted RBP9.41□□□□□ -0.9
LINC01090-201ENST00000415357 SMARCAL1Q9NZC9 954 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 OGFRQ9NZT2 677 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 SLC2A6Q9UGQ3 507 aa9.41□□□□□ -0.9
LINC01090-201ENST00000415357 A0A1W2PNR3 127 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 LILRA5A6NI73 299 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 AGAP14A8MT82 685 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 E7EVH7 732 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 PSMD3O43242 534 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 APRTP07741 180 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 FGF3P11487 239 aaPredicted RBP9.4□□□□□ -0.9
LINC01090-201ENST00000415357 MSNP26038 577 aaKnown RBP9.4□□□□□ -0.9
LINC01090-201ENST00000415357 ACRV1P26436 265 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 HALP42357 657 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 CXADRP78310 365 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 DMPKQ09013 629 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 CDH17Q12864 832 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 SRSF6Q13247 344 aaKnown RBP9.4□□□□□ -0.9
LINC01090-201ENST00000415357 SQSTM1Q13501 440 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 GPR18Q14330 331 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 TGIF1Q15583 401 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 CLPPQ16740 277 aaPredicted RBP9.4□□□□□ -0.9
LINC01090-201ENST00000415357 BCL7AQ4VC05 210 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 WASH2PQ6VEQ5 465 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 TAS2R42Q7RTR8 314 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 LINC00523Q86TU6 105 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 ZFAND4Q86XD8 727 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 FAM129CQ86XR2 697 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 REXO1L1PQ8IX06 675 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 SLC35F6Q8N357 371 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 PRELID2Q8N945 189 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 STYXQ8WUJ0 223 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 UBE2Q2Q8WVN8 375 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 RSC1A1Q92681 617 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 ULK4Q96C45 1275 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 RNF31Q96EP0 1072 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 DCUN1D1Q96GG9 259 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 CDKN2AIPNLQ96HQ2 116 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 MS4A14Q96JA4 679 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 ZNF778Q96MU6 729 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 FCRL3Q96P31 734 aaPredicted RBP9.4□□□□□ -0.9
LINC01090-201ENST00000415357 COPS8Q99627 209 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.4□□□□□ -0.9
LINC01090-201ENST00000415357 WWP1Q9H0M0 922 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 PRORYQ9H606 182 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 CPNE5Q9HCH3 593 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 WASH6PQ9NQA3 447 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 POT1Q9NUX5 634 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 OCIAD1Q9NX40 245 aa9.4□□□□□ -0.9
LINC01090-201ENST00000415357 AKAP7Q9P0M2 348 aaPredicted RBP9.4□□□□□ -0.9
LINC01090-201ENST00000415357 PAK5Q9P286 719 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms