RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 ZSCAN12O43309 604 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 CDK14O94921 469 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 IPO7O95373 1038 aaKnown RBP9.32□□□□□ -0.92
RFFL-203ENST00000413582 ZBTB11O95625 1053 aaPredicted RBP9.32□□□□□ -0.92
RFFL-203ENST00000413582 FTLP02792 175 aaPredicted RBP9.32□□□□□ -0.92
RFFL-203ENST00000413582 CD48P09326 243 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 PIRTP0C851 137 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 VCLP18206 1134 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 CD86P42081 329 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 HALP42357 657 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 ELOAQ14241 798 aaKnown RBP9.32□□□□□ -0.92
RFFL-203ENST00000413582 GALNT3Q14435 633 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 NAA30Q147X3 362 aaPredicted RBP9.32□□□□□ -0.92
RFFL-203ENST00000413582 NCF4Q15080 339 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 PAFAH1B3Q15102 231 aaKnown RBP9.32□□□□□ -0.92
RFFL-203ENST00000413582 PLCL1Q15111 1095 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 RPE65Q16518 533 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 ZNF789Q5FWF6 425 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 IGFL3Q6UXB1 125 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 FAM83HQ6ZRV2 1179 aaPredicted RBP9.32□□□□□ -0.92
RFFL-203ENST00000413582 ZNF662Q6ZS27 426 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 MRGPREQ86SM8 312 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 TRAPPC5Q8IUR0 188 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 SYTL1Q8IYJ3 562 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 ST6GALNAC3Q8NDV1 305 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 LRRN4Q8WUT4 740 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 CPT1BQ92523 772 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 SGSM3Q96HU1 749 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 PPM1MQ96MI6 270 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 ZNF830Q96NB3 372 aaPredicted RBP9.32□□□□□ -0.92
RFFL-203ENST00000413582 TSGA13Q96PP4 275 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 VPS35Q96QK1 796 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 TRIB3Q96RU7 358 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 CHP1Q99653 195 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 ILKAPQ9H0C8 392 aaPredicted RBP9.32□□□□□ -0.92
RFFL-203ENST00000413582 DEF6Q9H4E7 631 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 LUC7LQ9NQ29 371 aaKnown RBP9.32□□□□□ -0.92
RFFL-203ENST00000413582 RAD18Q9NS91 495 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 PCMTD2Q9NV79 361 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 HAUS2Q9NVX0 235 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 NENFQ9UMX5 172 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 SHOC2Q9UQ13 582 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 ZNF711Q9Y462 761 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 PCDHGA10Q9Y5H3 936 aa9.32□□□□□ -0.92
RFFL-203ENST00000413582 GOLGA6L9A6NEM1 432 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 F5H423 210 aaPredicted RBP9.31□□□□□ -0.92
RFFL-203ENST00000413582 E2F3O00716 465 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 AKR1B10O60218 316 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 MTHFD1P11586 935 aaKnown RBP9.31□□□□□ -0.92
RFFL-203ENST00000413582 GZMAP12544 262 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 BPIP17213 487 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 CCNCP24863 283 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 KPNA2P52292 529 aaKnown RBP9.31□□□□□ -0.92
RFFL-203ENST00000413582 DMPKQ09013 629 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 KRT81Q14533 505 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 MYBPC3Q14896 1274 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 SPA17Q15506 151 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 ZRSR2Q15696 482 aaKnown RBP9.31□□□□□ -0.92
RFFL-203ENST00000413582 SLC18A3Q16572 532 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 IFI16Q16666 785 aaKnown RBP9.31□□□□□ -0.92
RFFL-203ENST00000413582 KYNUQ16719 465 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 PTCHD3Q3KNS1 767 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 LYPLAL1Q5VWZ2 237 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 FBXO38Q6PIJ6 1188 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 RAD9BQ6WBX8 426 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 TMC3Q7Z5M5 1100 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 CUZD1Q86UP6 607 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 OOSP2Q86WS3 158 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 RAB43Q86YS6 212 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 CARFQ8N187 725 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 TTC30BQ8N4P2 665 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 NIPA2Q8N8Q9 360 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 FAM71BQ8TC56 605 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 TLR10Q9BXR5 811 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 ADGRE3Q9BY15 652 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 SOHLH2Q9NX45 425 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 MYO1AQ9UBC5 1043 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 INTUQ9ULD6 942 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 COPG1Q9Y678 874 aaKnown RBP9.31□□□□□ -0.92
RFFL-203ENST00000413582 PCNX1Q96RV3 2341 aa9.31□□□□□ -0.92
RFFL-203ENST00000413582 A0A087X0T9 212 aa9.3□□□□□ -0.92
RFFL-203ENST00000413582 SOWAHDA6NJG2 315 aa9.3□□□□□ -0.92
RFFL-203ENST00000413582 DDX3YO15523 660 aaKnown RBP9.3□□□□□ -0.92
RFFL-203ENST00000413582 KCNJ13O60928 360 aa9.3□□□□□ -0.92
RFFL-203ENST00000413582 TUBB4AP04350 444 aa9.3□□□□□ -0.92
RFFL-203ENST00000413582 ALPPP05187 535 aa9.3□□□□□ -0.92
RFFL-203ENST00000413582 CCDC175P0C221 793 aa9.3□□□□□ -0.92
RFFL-203ENST00000413582 FAM228BP0C875 321 aa9.3□□□□□ -0.92
RFFL-203ENST00000413582 MYBL1P10243 752 aa9.3□□□□□ -0.92
RFFL-203ENST00000413582 MSNP26038 577 aaKnown RBP9.3□□□□□ -0.92
RFFL-203ENST00000413582 CA5AP35218 305 aa9.3□□□□□ -0.92
RFFL-203ENST00000413582 ARCN1P48444 511 aaKnown RBP9.3□□□□□ -0.92
RFFL-203ENST00000413582 ARSEP51690 589 aa9.3□□□□□ -0.92
RFFL-203ENST00000413582 CTSCP53634 463 aa9.3□□□□□ -0.92
RFFL-203ENST00000413582 PER3P56645 1201 aa9.3□□□□□ -0.92
RFFL-203ENST00000413582 GBE1Q04446 702 aa9.3□□□□□ -0.92
RFFL-203ENST00000413582 TMEM115Q12893 351 aaPredicted RBP9.3□□□□□ -0.92
RFFL-203ENST00000413582 ZBTB17Q13105 803 aa9.3□□□□□ -0.92
RFFL-203ENST00000413582 DPYSL3Q14195 570 aa9.3□□□□□ -0.92
RFFL-203ENST00000413582 PIGHQ14442 188 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms