RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 DRG2P55039 364 aaKnown RBP11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 GPAT4Q86UL3 456 aa11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 FOXRED2Q8IWF2 684 aa11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 FSTL5Q8N475 847 aaPredicted RBP11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 ZNF398Q8TD17 642 aa11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 HDAC7Q8WUI4 952 aa11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 DCAKDQ8WVC6 231 aa11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 CHST7Q9NS84 486 aa11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 ZNF639Q9UID6 485 aa11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 ZNF878C9JN71 531 aa11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 ZBTB22O15209 634 aa11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 PDPK1O15530 556 aa11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 FGF1P05230 155 aa11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 CDKN1CP49918 316 aaPredicted RBP11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 EVX2Q03828 476 aa11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 PPIDQ08752 370 aaKnown RBP11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 MAMLD1Q13495 774 aa11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 C1orf189Q5VU69 101 aa11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 METTL27Q8N6F8 245 aaPredicted RBP11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 ZSCAN4Q8NAM6 433 aaPredicted RBP11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 BTN2A3PQ96KV6 586 aa11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 MBOAT7Q96N66 472 aa11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 CHIAQ9BZP6 476 aa11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 KIF1AQ12756 1690 aa11.1□□□□□ -0.63
PRPF40A-202ENST00000410080 NR2F6P10588 404 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 CXCR1P25024 350 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 ZNF143P52747 638 aaPredicted RBP11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 FUT10Q6P4F1 479 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 LRRC69Q6ZNQ3 347 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 MON1AQ86VX9 555 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 PLA2G15Q8NCC3 412 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 TRMT10AQ8TBZ6 339 aaKnown RBP11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 FNIP1Q8TF40 1166 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 LRTM1Q9HBL6 345 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 VNN3Q9NY84 501 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 CCDC163A0A0D9SF12 145 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 CLDN9O95484 217 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 PRAMEF1O95521 474 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 MAGP20916 626 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 AKR1D1P51857 326 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 NCBP2P52298 156 aaKnown RBP eCLIP11.09□□□□□ -0.632e-16■□□□□ 8.3
PRPF40A-202ENST00000410080 LIPEQ05469 1076 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 ENPP2Q13822 863 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 CCDC80Q76M96 950 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 RELL1Q8IUW5 271 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 CEP97Q8IW35 865 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 ZNF567Q8N184 647 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 MECRQ9BV79 373 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 PNPLA8Q9NP80 782 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 BLOC1S4Q9NUP1 217 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 MUSKO15146 869 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 DCST1Q5T197 706 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 IFNL1Q8IU54 200 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 MMAAQ8IVH4 418 aaKnown RBP11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 IL31RAQ8NI17 732 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 PHF12Q96QT6 1004 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 GFM1Q96RP9 751 aaKnown RBP11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 CXorf56Q9H5V9 222 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 CARS2Q9HA77 564 aaKnown RBP11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 E7ENQ6 273 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 CBX6O95503 412 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 SRCP12931 536 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 MAP3K8P41279 467 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 LAPTM5Q13571 262 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 ERICH5Q6P6B1 374 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 TCAIMQ8N3R3 496 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 ZNF366Q8N895 744 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 PIGXQ8TBF5 258 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 TCEAL3Q969E4 200 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 TIFAQ96CG3 184 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 NUS1Q96E22 293 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 TMEM134Q9H6X4 195 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 CENPMQ9NSP4 180 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 NDUFA13Q9P0J0 144 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 FKBP7Q9Y680 259 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 OTOFQ9HC10 1997 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 A0A087WXM4 84 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 ELOA3DA6NLF2 546 aaPredicted RBP11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 C8AP07357 584 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 GTF2H2Q13888 395 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 OCLNQ16625 522 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 ELOA3BQ3SY89 546 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 GTF2H2CQ6P1K8 395 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 SLC24A5Q71RS6 500 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 NXPE1Q8N323 547 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 ELOA3Q8NG57 546 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 PTCD3Q96EY7 689 aaKnown RBP11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 ZNF570Q96NI8 536 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 UBR1Q8IWV7 1749 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 SCN2AQ99250 2005 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 HSPA12AO43301 675 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 LDB2O43679 373 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 ATP6V1G2O95670 118 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 ACTR1AP61163 376 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 MRPS5P82675 430 aaKnown RBP11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 ST3GAL1Q11201 340 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 GRM2Q14416 872 aa11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 PCBP1Q15365 356 aaKnown RBP eCLIP11.09□□□□□ -0.63
PRPF40A-202ENST00000410080 CMTR2Q8IYT2 770 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms