RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 RPP30P78346 268 aaKnown RBP4.35□□□□□ -1.71
CLK1-203ENST00000409769 GALNT2Q10471 571 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 STXBP2Q15833 593 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 HSPB2Q16082 182 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 HIST2H2ACQ16777 129 aaPredicted RBP4.35□□□□□ -1.71
CLK1-203ENST00000409769 SOWAHAQ2M3V2 549 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 ESCO2Q56NI9 601 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 PRAMEF19Q5SWL8 479 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 WDR78Q5VTH9 848 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 SLC22A25Q6T423 547 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 ARMCX2Q7L311 632 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 RRM2BQ7LG56 351 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 GJC3Q8NFK1 279 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 NFKBIDQ8NI38 313 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 LMO3Q8TAP4 145 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 RNF125Q96EQ8 232 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 HES6Q96HZ4 224 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 HSD17B14Q9BPX1 270 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 ZNF577Q9BSK1 485 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 TEKT3Q9BXF9 490 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 UNC45AQ9H3U1 944 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 CLSTN2Q9H4D0 955 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 ZNF556Q9HAH1 456 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 BRF2Q9HAW0 419 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 SMYD2Q9NRG4 433 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 DDX19AQ9NUU7 478 aaKnown RBP4.35□□□□□ -1.71
CLK1-203ENST00000409769 KCND2Q9NZV8 630 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 NFE2L3Q9Y4A8 694 aa4.35□□□□□ -1.71
CLK1-203ENST00000409769 IGKV6D-21A0A0A0MT36 114 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 A0A1B0GUV1 79 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 DYTNA2CJ06 578 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 GOLGA6L4A6NEF3 574 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 B4DLN1 442 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 POLR2DO15514 142 aaKnown RBP4.34□□□□□ -1.71
CLK1-203ENST00000409769 KCNJ13O60928 360 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 MED24O75448 989 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 MTA2O94776 668 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 ZNF432O94892 652 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 VNN2O95498 520 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 CCNE2O96020 404 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 HOXB5P09067 269 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 TFPIP10646 304 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 CD58P19256 250 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 AGAP20933 346 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 MUTP22033 750 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 UBA1P22314 1058 aaKnown RBP4.34□□□□□ -1.71
CLK1-203ENST00000409769 RPA1P27694 616 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 RGS2P41220 211 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 PSMC4P43686 418 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 TUBP50607 506 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 SP3Q02447 781 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 KIF5AQ12840 1032 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 FOXD4Q12950 439 aaPredicted RBP4.34□□□□□ -1.71
CLK1-203ENST00000409769 TRAF3Q13114 568 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 KARSQ15046 597 aaKnown RBP4.34□□□□□ -1.71
CLK1-203ENST00000409769 CCL14Q16627 93 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 TMEM266Q2M3C6 531 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 ALFQ53S48 1182 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 CCDC183Q5T5S1 534 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 CAVIN1Q6NZI2 390 aaKnown RBP4.34□□□□□ -1.71
CLK1-203ENST00000409769 SPSB3Q6PJ21 355 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 METTL7BQ6UX53 244 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 KRBA2Q6ZNG9 492 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 CCDC73Q6ZRK6 1079 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 GPAT4Q86UL3 456 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 CATSPER3Q86XQ3 398 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 FBXO16Q8IX29 292 aaPredicted RBP4.34□□□□□ -1.71
CLK1-203ENST00000409769 RDM1Q8NG50 284 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 NEK9Q8TD19 979 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 CDHR1Q96JP9 859 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 LRFN5Q96NI6 719 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 LBHD1Q9BQE6 289 aaPredicted RBP4.34□□□□□ -1.71
CLK1-203ENST00000409769 FUCA2Q9BTY2 467 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 POLR3CQ9BUI4 534 aaPredicted RBP4.34□□□□□ -1.71
CLK1-203ENST00000409769 RAB34Q9BZG1 259 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 TTYH1Q9H313 450 aaPredicted RBP4.34□□□□□ -1.71
CLK1-203ENST00000409769 TUFT1Q9NNX1 390 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 UBN1Q9NPG3 1134 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 TBC1D22BQ9NU19 505 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 C20orf141Q9NUB4 165 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 BLOC1S4Q9NUP1 217 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 LRWD1Q9UFC0 647 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 ERRFI1Q9UJM3 462 aaPredicted RBP4.34□□□□□ -1.71
CLK1-203ENST00000409769 SCN10AQ9Y5Y9 1956 aa4.34□□□□□ -1.71
CLK1-203ENST00000409769 IGSF9BQ9UPX0 1349 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 KDM3AQ9Y4C1 1321 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 IGLV5-52A0A0A0MRZ9 124 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 CPED1A4D0V7 1026 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 DDX39AO00148 427 aaKnown RBP4.33□□□□□ -1.72
CLK1-203ENST00000409769 TACC1O75410 805 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 SERPINI2O75830 405 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 GAGE7O76087 117 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 SLITRK3O94933 977 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 STBD1O95210 358 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 LYPLA2O95372 231 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 MT-CYBP00156 380 aaPredicted RBP4.33□□□□□ -1.72
CLK1-203ENST00000409769 GAGE12FP0CL80 117 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 GAGE12GP0CL81 117 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 GAGE12IP0CL82 117 aa4.33□□□□□ -1.72
CLK1-203ENST00000409769 IRF1P10914 325 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms