RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 EGFL8Q99944 293 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 CD84Q9UIB8 345 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 FBXO10Q9UK96 956 aa19.78■□□□□ 0.76
USP39-204ENST00000409766 PRSS51A0A1B0GVH4 220 aa19.77■□□□□ 0.76
USP39-204ENST00000409766 PER2O15055 1255 aa19.77■□□□□ 0.76
USP39-204ENST00000409766 LEFTY1O75610 366 aa19.77■□□□□ 0.76
USP39-204ENST00000409766 ZNF30P17039 623 aa19.77■□□□□ 0.76
USP39-204ENST00000409766 HTR6P50406 440 aa19.77■□□□□ 0.76
USP39-204ENST00000409766 ARHGEF7Q14155 803 aa19.77■□□□□ 0.76
USP39-204ENST00000409766 METTL2BQ6P1Q9 378 aaKnown RBP19.77■□□□□ 0.76
USP39-204ENST00000409766 SPATA24Q86W54 205 aa19.77■□□□□ 0.76
USP39-204ENST00000409766 MINDY1Q8N5J2 469 aa19.77■□□□□ 0.76
USP39-204ENST00000409766 UCMAQ8WVF2 138 aa19.77■□□□□ 0.76
USP39-204ENST00000409766 ATP6V1E2Q96A05 226 aa19.77■□□□□ 0.76
USP39-204ENST00000409766 LRRC3BQ96PB8 259 aa19.77■□□□□ 0.76
USP39-204ENST00000409766 PKD2L2Q9NZM6 624 aa19.77■□□□□ 0.76
USP39-204ENST00000409766 ABCD2Q9UBJ2 740 aa19.77■□□□□ 0.76
USP39-204ENST00000409766 MBD1Q9UIS9 605 aaPredicted RBP19.77■□□□□ 0.76
USP39-204ENST00000409766 A0A1W2PP18 115 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 EIF4E1BA6NMX2 242 aaKnown RBP19.76■□□□□ 0.75
USP39-204ENST00000409766 FXYD1O00168 92 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 ZNF197O14709 1029 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 SLC9A3R1O14745 358 aaPredicted RBP19.76■□□□□ 0.75
USP39-204ENST00000409766 KATNA1O75449 491 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 OR56A5P0C7T3 313 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 GDF5P43026 501 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 ATP6AP1LQ52LC2 224 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 PDCD4Q53EL6 469 aaKnown RBP19.76■□□□□ 0.75
USP39-204ENST00000409766 C6orf10Q5SRN2 563 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 IL27RAQ6UWB1 636 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 MILR1Q7Z6M3 343 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 TMEM126BQ8IUX1 230 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 PLCD3Q8N3E9 789 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 SFRP1Q8N474 314 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 FNDC5Q8NAU1 212 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 SPDL1Q96EA4 605 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 C1orf50Q9BV19 199 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 WWOXQ9NZC7 414 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 RIMS3Q9UJD0 308 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 EIF3FO00303 357 aaPredicted RBP19.76■□□□□ 0.75
USP39-204ENST00000409766 SYNCRIPO60506 623 aaKnown RBP19.76■□□□□ 0.75
USP39-204ENST00000409766 SLC22A3O75751 556 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 C8BP07358 591 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 CYP2A6P11509 494 aaPredicted RBP19.76■□□□□ 0.75
USP39-204ENST00000409766 AOAHP28039 575 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 WEE1P30291 646 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 VIPR1P32241 457 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 NNMTP40261 264 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 UFM1P61960 85 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 MRPS35P82673 323 aaKnown RBP19.76■□□□□ 0.75
USP39-204ENST00000409766 GBX1Q14549 363 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 DHCR24Q15392 516 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 ARSIQ5FYB1 569 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 PRMT9Q6P2P2 845 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 IL1RL2Q9HB29 575 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 SMOXQ9NWM0 555 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 OPTCQ9UBM4 332 aa19.76■□□□□ 0.75
USP39-204ENST00000409766 TSPAN11A1L157 253 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 CTSLP07711 333 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 AQP4P55087 323 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 ADGRE1Q14246 886 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 ABRAXAS2Q15018 415 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 HSD11B1LQ7Z5J1 315 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 LILRA2Q8N149 483 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 ITFG1Q8TB96 612 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 PPP2R3CQ969Q6 453 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 LRRC58Q96CX6 371 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 SPATA16Q9BXB7 569 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 EBF3Q9H4W6 596 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 TMEM45AQ9NWC5 275 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 GID8Q9NWU2 228 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 ZIM2Q9NZV7 527 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 MRPS23Q9Y3D9 190 aaKnown RBP19.75■□□□□ 0.75
USP39-204ENST00000409766 PLXNA2O75051 1894 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 ASPDHA6ND91 283 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 K7EPI3 171 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 NME4O00746 187 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 LSM1O15116 133 aaKnown RBP19.75■□□□□ 0.75
USP39-204ENST00000409766 CISD3P0C7P0 127 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 ATP1B2P14415 290 aaPredicted RBP19.75■□□□□ 0.75
USP39-204ENST00000409766 MYOGP15173 224 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 SYN1P17600 705 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 KCNK10P57789 538 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 DCDC1P59894 354 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 RHDQ02161 417 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 GATA6Q92908 595 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 LRGUKQ96M69 825 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 HBEGFQ99075 208 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 FAM83DQ9H4H8 585 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 COPS7BQ9H9Q2 264 aaPredicted RBP19.75■□□□□ 0.75
USP39-204ENST00000409766 PCDH12Q9NPG4 1184 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 HEBP1Q9NRV9 189 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 ANGPTL3Q9Y5C1 460 aa19.75■□□□□ 0.75
USP39-204ENST00000409766 NUP210Q8TEM1 1887 aaPredicted RBP19.74■□□□□ 0.75
USP39-204ENST00000409766 CYP17A1P05093 508 aa19.74■□□□□ 0.75
USP39-204ENST00000409766 POU2F2P09086 479 aa19.74■□□□□ 0.75
USP39-204ENST00000409766 TIMP2P16035 220 aa19.74■□□□□ 0.75
USP39-204ENST00000409766 VASPP50552 380 aaPredicted RBP19.74■□□□□ 0.75
USP39-204ENST00000409766 EMX2Q04743 252 aa19.74■□□□□ 0.75
USP39-204ENST00000409766 FOXM1Q08050 763 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms