RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 ADI1Q9BV57 179 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 OR2AG1Q9H205 316 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 THUMPD1Q9NXG2 353 aaKnown RBP16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 POLR1DQ9Y2S0 133 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 ANXA4P09525 319 aaPredicted RBP16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 BMP7P18075 431 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 FGFR3P22607 806 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 OGDHQ02218 1023 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 KLF10Q13118 480 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 FBXO43Q4G163 708 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 KLHDC10Q6PID8 442 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 TMC8Q8IU68 726 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 P2RY13Q9BPV8 354 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 C1orf109Q9NX04 203 aa16.56■□□□□ 0.24
PCDHA13-202ENST00000409494 FAM159BA6NKW6 160 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 TEX28O15482 410 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 SLC25A12O75746 678 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 ACVRL1P37023 503 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 GRIA3P42263 894 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 MAGEA10P43363 369 aaPredicted RBP16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 MAPK12P53778 367 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 FOLH1Q04609 750 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 TRIM32Q13049 653 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 NR1D2Q14995 579 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 CCDC85BQ15834 202 aaPredicted RBP16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 TBC1D21Q8IYX1 336 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 DNAJB14Q8TBM8 379 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 SMPDL3AQ92484 453 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 PGAP3Q96FM1 320 aaPredicted RBP16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 KIFC1Q9BW19 673 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 GATA5Q9BWX5 397 aaPredicted RBP16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 PAIP1Q9H074 479 aaKnown RBP16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 S100A14Q9HCY8 104 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 ACTR1BP42025 376 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 POLR2JP52435 117 aaKnown RBP16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 RABGGTBP53611 331 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 ACTR1AP61163 376 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 PRR5P85299 388 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 C2orf80Q0P641 193 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 DCTN2Q13561 401 aaKnown RBP16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 NEDD8Q15843 81 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 RINLQ6ZS11 566 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 TSPAN14Q8NG11 270 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 OR4A15Q8NGL6 344 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 CADM1Q9BY67 442 aaKnown RBP16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 KLHL3Q9UH77 587 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 CD84Q9UIB8 345 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 FAM20BO75063 409 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 AVPR1BP47901 424 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 PSMD4P55036 377 aaKnown RBP16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 NIPAL1Q6NVV3 410 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 Q6ZVU0 165 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 SLC30A8Q8IWU4 369 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 PQLC1Q8N2U9 271 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 PHF10Q8WUB8 498 aaKnown RBP16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 MAGEE1Q9HCI5 957 aa16.55■□□□□ 0.24
PCDHA13-202ENST00000409494 SNAP91O60641 907 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 STX11O75558 287 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 CFHP08603 1231 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 GRIA2P42262 883 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 SUZ12Q15022 739 aaKnown RBP16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 PRKD1Q15139 912 aaPredicted RBP16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 PLA2G4EQ3MJ16 856 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 CHCHD4Q8N4Q1 142 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 POMGNT2Q8NAT1 580 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 OR2T12Q8NG77 320 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 HMGB4Q8WW32 186 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 C1orf50Q9BV19 199 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 RIOK2Q9BVS4 552 aaKnown RBP16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 ATG10Q9H0Y0 220 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 NSUN3Q9H649 340 aaKnown RBP16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 IL6P05231 212 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 ATP1B2P14415 290 aaPredicted RBP16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 GJA1P17302 382 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 TSPAN8P19075 237 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 KHDC1Q4VXA5 237 aaKnown RBP16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 ROPN1LQ96C74 230 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 SLC29A3Q9BZD2 475 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 PSMD13Q9UNM6 376 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 ATP6AP2A0A1C7CYW4 349 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 J3KR12 359 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 TSPAN6O43657 245 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 PEX1O43933 1283 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 ATP6AP2O75787 350 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 CCNYL3P0C7X3 344 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 TPP2P29144 1249 aaPredicted RBP16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 ITGA1P56199 1179 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 SCIMPQ6UWF3 145 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 RELL1Q8IUW5 271 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 FBXO30Q8TB52 745 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 CLPTM1LQ96KA5 538 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 UBXN7O94888 489 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 PIM1P11309 404 aaPredicted RBP16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 IMPDH1P20839 514 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 MPSTP25325 297 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 GATMP50440 423 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 TDRD1Q9BXT4 1180 aaKnown RBP16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 MRPS26Q9BYN8 205 aaKnown RBP16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 SLITRK2Q9H156 845 aa16.54■□□□□ 0.24
PCDHA13-202ENST00000409494 SUCOQ9UBS9 1254 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms