RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 UBE2ZQ9H832 354 aaPredicted RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 SP140LQ9H930 580 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 THAP1Q9NVV9 213 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 FBXO34Q9NWN3 711 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 PPP4R1LQ9P1A2 415 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 COPG2Q9UBF2 871 aa5.43□□□□□ -1.54
CLK1-202ENST00000409403 ARID1BQ8NFD5 2236 aaPredicted RBP5.43□□□□□ -1.54
CLK1-202ENST00000409403 PRSS51A0A1B0GVH4 220 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 A0A1W2PPM1 405 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 ARHGEF35A5YM69 484 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 NPEPPSL1A6NEC2 478 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 EIF3DO15371 548 aaKnown RBP eCLIP5.42□□□□□ -1.54
CLK1-202ENST00000409403 MSI1O43347 362 aaKnown RBP5.42□□□□□ -1.54
CLK1-202ENST00000409403 ZC3H11AO75152 810 aaKnown RBP eCLIP5.42□□□□□ -1.541e-16■■■□□ 18.6
CLK1-202ENST00000409403 DNAJB5O75953 348 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 MYO1DO94832 1006 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 IL18RAPO95256 599 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 PDE8BO95263 885 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 NR3C1P04150 777 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 KRT8P05787 483 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 ABCB1P08183 1280 aaPredicted RBP5.42□□□□□ -1.54
CLK1-202ENST00000409403 GAP43P17677 238 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 BMP7P18075 431 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 ITIH1P19827 911 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 KCNA5P22460 613 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 TNFSF4P23510 183 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 IL32P24001 234 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 MGAT1P26572 445 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 PKLRP30613 574 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 SERPINB10P48595 397 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 MARCKSL1P49006 195 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 IST1P53990 364 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 NAPAP54920 295 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 JAG1P78504 1218 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 SLC25A3Q00325 362 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 MYL7Q01449 175 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 DMWDQ09019 674 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 RIPPLY1Q0D2K3 151 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 GALNT1Q10472 559 aaPredicted RBP5.42□□□□□ -1.54
CLK1-202ENST00000409403 CDC20Q12834 499 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 PPIL2Q13356 520 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 SELPLGQ14242 412 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 EFTUD2Q15029 972 aaKnown RBP eCLIP5.42□□□□□ -1.544e-8■■■■□ 23.4
CLK1-202ENST00000409403 SF3B4Q15427 424 aaKnown RBP eCLIP5.42□□□□□ -1.548e-9■■■■■ 52
CLK1-202ENST00000409403 CCDC142Q17RM4 750 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 LEXMQ3ZCV2 418 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 AASDHQ4L235 1098 aaPredicted RBP5.42□□□□□ -1.54
CLK1-202ENST00000409403 PPP6R3Q5H9R7 873 aaPredicted RBP5.42□□□□□ -1.54
CLK1-202ENST00000409403 STXBP5Q5T5C0 1151 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 ANKRD26P1Q6NSI1 321 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 TCTN3Q6NUS6 607 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 AADACL2Q6P093 401 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 TTC33Q6PID6 262 aaPredicted RBP5.42□□□□□ -1.54
CLK1-202ENST00000409403 SLC30A10Q6XR72 485 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 SLC39A5Q6ZMH5 540 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 IGFN1Q86VF2 1251 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 GPBP1Q86WP2 473 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 ERO1BQ86YB8 467 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 NUDCD3Q8IVD9 361 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 CCDC28AQ8IWP9 274 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 SPARTQ8N0X7 666 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 RNF169Q8NCN4 708 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 MDGA1Q8NFP4 955 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 OR52N2Q8NGI0 321 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 OLIG1Q8TAK6 271 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 CAPSLQ8WWF8 208 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 FAM111AQ96PZ2 611 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 SNX18Q96RF0 628 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 TMEM79Q9BSE2 394 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 RAD21L1Q9H4I0 556 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 GPN2Q9H9Y4 310 aaPredicted RBP5.42□□□□□ -1.54
CLK1-202ENST00000409403 AS3MTQ9HBK9 375 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 PCDH9Q9HC56 1237 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 STARD7Q9NQZ5 370 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 PARVAQ9NVD7 372 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 GDAP2Q9NXN4 497 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 NPAP1Q9NZP6 1156 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 SLC17A7Q9P2U7 560 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 IPO11Q9UI26 975 aaKnown RBP5.42□□□□□ -1.54
CLK1-202ENST00000409403 DRG1Q9Y295 367 aaKnown RBP5.42□□□□□ -1.54
CLK1-202ENST00000409403 WBP11Q9Y2W2 641 aaKnown RBP5.42□□□□□ -1.54
CLK1-202ENST00000409403 FRYLO94915 3013 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 NBEAQ8NFP9 2946 aa5.42□□□□□ -1.54
CLK1-202ENST00000409403 EMSYQ7Z589 1322 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 ABHD14A-ACY1A0A1B0GW23 586 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 CDHR4A6H8M9 788 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 POM121BA6NF01 834 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 SAC3D1A6NKF1 404 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 SNTNA6NMZ2 147 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 ZNF785A8K8V0 405 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 MEI4A8MW99 385 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 AP3B1O00203 1094 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 BTN3A1O00481 513 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 HAT1O14929 419 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 TBC1D4O60343 1298 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 SNNO75324 88 aaPredicted RBP5.41□□□□□ -1.54
CLK1-202ENST00000409403 GUCY1B2O75343 617 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 JRKO75564 520 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 PLA2G4BP0C869 781 aa5.41□□□□□ -1.54
CLK1-202ENST00000409403 RALBP11234 206 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms